RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SNX25Q9H3E2 840 aa8.33□□□□□ -1.08
PNKP-229ENST00000637897 KIF9Q9HAQ2 790 aa8.33□□□□□ -1.08
PNKP-229ENST00000637897 CSNK1G1Q9HCP0 422 aa8.33□□□□□ -1.08
PNKP-229ENST00000637897 DLL3Q9NYJ7 618 aa8.33□□□□□ -1.08
PNKP-229ENST00000637897 CHORDC1Q9UHD1 332 aaPredicted RBP8.33□□□□□ -1.08
PNKP-229ENST00000637897 SPAG17Q6Q759 2223 aa8.33□□□□□ -1.08
PNKP-229ENST00000637897 TRAV19A0A0A6YYK7 116 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 ESPNB1AK53 854 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 IKBKBO14920 756 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 TRIM24O15164 1050 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 MAPK13O15264 365 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 COCHO43405 550 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 RNF40O75150 1001 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 TBX18O95935 607 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 CYP17A1P05093 508 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 MYL1P05976 194 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 PTMAP06454 111 aaKnown RBP8.32□□□□□ -1.08
PNKP-229ENST00000637897 CKMP06732 381 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 TPM3P06753 285 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 USP17L7P0C7H9 530 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 CD44P16070 742 aaKnown RBP8.32□□□□□ -1.08
PNKP-229ENST00000637897 NR2F2P24468 414 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 HOXA6P31267 233 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 PRCPP42785 496 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 CCR3P51677 355 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 VAMP7P51809 220 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 SLC5A3P53794 718 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 TNNC1P63316 161 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 BIRC3Q13489 604 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 TRPC3Q13507 836 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 TAF12Q16514 161 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 CBWD6Q4V339 395 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 ZNF667Q5HYK9 610 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 CBWD3Q5JTY5 395 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 DGKKQ5KSL6 1271 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 CBWD5Q5RIA9 395 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 CEP135Q66GS9 1140 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 HEATR6Q6AI08 1181 aaKnown RBP8.32□□□□□ -1.08
PNKP-229ENST00000637897 RHBDF2Q6PJF5 856 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 LUZP1Q86V48 1076 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 NUP93Q8N1F7 819 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 GOLGA5Q8TBA6 731 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 SLC2A14Q8TDB8 520 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 RUBCNQ92622 972 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 TATDN2Q93075 761 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 CEP295NLQ96MC4 621 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 GCNAQ96QF7 691 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 ARID3AQ99856 593 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 IER2Q9BTL4 223 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 CCSER2Q9H7U1 834 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 NMUR1Q9HB89 426 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 RXFP3Q9NSD7 469 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 FAM49BQ9NUQ9 324 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 DUS2Q9NX74 493 aaKnown RBP8.32□□□□□ -1.08
PNKP-229ENST00000637897 SMPD4Q9NXE4 827 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 GMIPQ9P107 970 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 UXTQ9UBK9 157 aaPredicted RBP8.32□□□□□ -1.08
PNKP-229ENST00000637897 ZMYM5Q9UJ78 669 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 CPQQ9Y646 472 aa8.32□□□□□ -1.08
PNKP-229ENST00000637897 GON4LQ3T8J9 2241 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 CNOT1A5YKK6 2376 aaKnown RBP8.31□□□□□ -1.08
PNKP-229ENST00000637897 MED19A0JLT2 244 aaPredicted RBP8.31□□□□□ -1.08
PNKP-229ENST00000637897 TRIM49BA6NDI0 452 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 BECN2A8MW95 431 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 GOLGA6L6A8MZA4 724 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 TRIM66O15016 1216 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 PHACTR2O75167 634 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 CILPO75339 1184 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 GABBR2O75899 941 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 ID4P47928 161 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 AP3M2P53677 418 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 TPM4P67936 248 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 IFRD2Q12894 506 aaPredicted RBP8.31□□□□□ -1.08
PNKP-229ENST00000637897 IQCB1Q15051 598 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 PDGFRLQ15198 375 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 MAPRE1Q15691 268 aaKnown RBP8.31□□□□□ -1.08
PNKP-229ENST00000637897 SGSM1Q2NKQ1 1148 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 EMC10Q5UCC4 262 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 ANKRD40Q6AI12 368 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 ZC3H14Q6PJT7 736 aaKnown RBP8.31□□□□□ -1.08
PNKP-229ENST00000637897 CLEC20AQ6ZU45 233 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 BHLHA9Q7RTU4 235 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 FILIP1Q7Z7B0 1213 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 SCD5Q86SK9 330 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 WDR5BQ86VZ2 330 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 ZSCAN30Q86W11 494 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 SYNPOQ8N3V7 929 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 UBR7Q8N806 425 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 ATRIPQ8WXE1 791 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 P2RY13Q9BPV8 354 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 FAM126AQ9BYI3 521 aaPredicted RBP8.31□□□□□ -1.08
PNKP-229ENST00000637897 KRT82Q9NSB4 513 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 TRPM5Q9NZQ8 1165 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 PCDHA5Q9Y5H7 936 aa8.31□□□□□ -1.08
PNKP-229ENST00000637897 MYH10P35580 1976 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 A0A0A0MRY4 1105 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 SMTNL1A8MU46 457 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 TULP2O00295 520 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 DCLK1O15075 740 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 MDM4O15151 490 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms