RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 IL9RQ01113 521 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 BIRC2Q13490 618 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 BYSLQ13895 437 aaKnown RBP5.76□□□□□ -1.49
CHD2-227ENST00000637572 PREPLQ4J6C6 727 aaPredicted RBP5.76□□□□□ -1.49
CHD2-227ENST00000637572 EPC2Q52LR7 807 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 MDH1BQ5I0G3 518 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 LRRC38Q5VT99 294 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 FAM171A1Q5VUB5 890 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 C17orf99Q6UX52 265 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 SLC47A2Q86VL8 602 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 HERC6Q8IVU3 1022 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 NUDCD1Q96RS6 583 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 DCLK3Q9C098 648 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 GANQ9H2C0 597 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 CYLDQ9NQC7 956 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 XPNPEP1Q9NQW7 623 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 DDIT4Q9NX09 232 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 IPPQ9Y573 584 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 LY75O60449 1722 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 A0A1B0GUA9 196 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 ARVCFO00192 962 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 TSPAN1O60635 241 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 GLI1P08151 1106 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 FGFR4P22455 802 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 MLH1P40692 756 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 SCNN1GP51170 649 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 GEMIN4P57678 1058 aaKnown RBP5.76□□□□□ -1.49
CHD2-227ENST00000637572 YWHAZP63104 245 aaKnown RBP5.76□□□□□ -1.49
CHD2-227ENST00000637572 USP41Q3LFD5 358 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 PAPD7Q5XG87 772 aaKnown RBP5.76□□□□□ -1.49
CHD2-227ENST00000637572 MMGT1Q8N4V1 131 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 RAB3IL1Q8TBN0 382 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 ACTRT1Q8TDG2 376 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 WDR24Q96S15 920 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 SENP1Q9P0U3 644 aa5.76□□□□□ -1.49
CHD2-227ENST00000637572 COL24A1Q17RW2 1714 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 A0A087WUV0 522 aaPredicted RBP5.75□□□□□ -1.49
CHD2-227ENST00000637572 FAM170AA1A519 330 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 M0QYT0 321 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 OPLAHO14841 1288 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 TREHO43280 583 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 FGF19O95750 216 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 MT-ND3P03897 115 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 PFKMP08237 780 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 PTPN1P18031 435 aaKnown RBP5.75□□□□□ -1.49
CHD2-227ENST00000637572 PMLP29590 882 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 CCR1P32246 355 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 GJA5P36382 358 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 TKTL1P51854 596 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 AP1B1Q10567 949 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 TFDP3Q5H9I0 405 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 KLC3Q6P597 504 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 PID1Q7Z2X4 250 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 SLFN11Q7Z7L1 901 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 CHSY1Q86X52 802 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 SLC13A5Q86YT5 568 aaPredicted RBP5.75□□□□□ -1.49
CHD2-227ENST00000637572 CCNJLQ8IV13 435 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 ARHGEF19Q8IW93 802 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 REXO1L1PQ8IX06 675 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 C10orf67Q8IYJ2 551 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 FIBCD1Q8N539 461 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 ANKRD52Q8NB46 1076 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.75□□□□□ -1.49
CHD2-227ENST00000637572 SLC39A7Q92504 469 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 LHX5Q9H2C1 402 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 PDZD7Q9H5P4 517 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 MRPL17Q9NRX2 175 aaKnown RBP5.75□□□□□ -1.49
CHD2-227ENST00000637572 NSMCE4AQ9NXX6 385 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 SAGE1Q9NXZ1 904 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 LMCD1Q9NZU5 365 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 MSRAQ9UJ68 235 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 PADI3Q9ULW8 664 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 SNX24Q9Y343 169 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 USP27XA6NNY8 438 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 F5H5T6 163 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 NDUFAB1O14561 156 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 NCK2O43639 380 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 NFICP08651 508 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 RRM1P23921 792 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 YWHAQP27348 245 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 FDFT1P37268 417 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 SLC6A3Q01959 620 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 GPS1Q13098 491 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 TUSC1Q2TAM9 212 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 TAF1BQ53T94 588 aaPredicted RBP5.75□□□□□ -1.49
CHD2-227ENST00000637572 EEF1DP3Q658K8 133 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 CDCA2Q69YH5 1023 aaPredicted RBP5.75□□□□□ -1.49
CHD2-227ENST00000637572 SPOPLQ6IQ16 392 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 CCDC62Q6P9F0 684 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 TRMT10CQ7L0Y3 403 aaKnown RBP5.75□□□□□ -1.49
CHD2-227ENST00000637572 LINC00523Q86TU6 105 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 PHF13Q86YI8 300 aaPredicted RBP5.75□□□□□ -1.49
CHD2-227ENST00000637572 NPLOC4Q8TAT6 608 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 SPON2Q9BUD6 331 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 DDX47Q9H0S4 455 aaKnown RBP5.75□□□□□ -1.49
CHD2-227ENST00000637572 TRPC7Q9HCX4 862 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 SHANK3Q9BYB0 1731 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 SLX4Q8IY92 1834 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 MYH1P12882 1939 aa5.75□□□□□ -1.49
CHD2-227ENST00000637572 MYH7P12883 1935 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms