RNA–Protein interactions for RNA: ENST00000637535.1

CACNB4-256, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,731 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-256	ENST00000637535	CCNE2	O96020	404 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	AFP	P02771	609 aa	Known RBP	7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	CDK4	P11802	303 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	FGFR4	P22455	802 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	AP1B1	Q10567	949 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	SUZ12	Q15022	739 aa	Known RBP	7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	DUSP6	Q16828	381 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	CFAP221	Q4G0U5	840 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	ANKRD54	Q6NXT1	300 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	SHC4	Q6S5L8	630 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	B3GNT6	Q6ZMB0	384 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	TTC30A	Q86WT1	665 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	MICU3	Q86XE3	530 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	WDR75	Q8IWA0	830 aa	Known RBP	7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	CCDC60	Q8IWA6	550 aa	Predicted RBP	7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	NELFCD	Q8IXH7	590 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	KIAA0319L	Q8IZA0	1049 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	PPFIBP2	Q8ND30	876 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	GIMAP8	Q8ND71	665 aa	Predicted RBP	7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	FAM13C	Q8NE31	585 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	PLEKHO2	Q8TD55	490 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	SUSD6	Q92537	303 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	ZNF184	Q99676	751 aa	Predicted RBP	7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	MXRA8	Q9BRK3	442 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	SPZ1	Q9BXG8	430 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	FTHL17	Q9BXU8	183 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	S1PR5	Q9H228	398 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	METTL14	Q9HCE5	456 aa	Known RBP	7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	ERVK-5	Q9HDB9	667 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	ENTPD7	Q9NQZ7	604 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	AIPL1	Q9NZN9	384 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	SSX2IP	Q9Y2D8	614 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	TSC22D4	Q9Y3Q8	395 aa		7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535	HBS1L	Q9Y450	684 aa	Known RBP	7.33	□□□□□ -1.24
CACNB4-256	ENST00000637535		A0A1W2PQC6	194 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	SH3PXD2B	A1X283	911 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	RRN3P2	A6NIE6	340 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535		C9IYK1	514 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	HNRNPCL1	O60812	293 aa	Known RBP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	CHN1	P15882	459 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	GM2A	P17900	193 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	ECHS1	P30084	290 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	NT5C2	P49902	561 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	RELA	Q04206	551 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	SPCS2	Q15005	226 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	CCDC14	Q49A88	953 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	NAALADL2	Q58DX5	795 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	HSP90AA4P	Q58FG1	418 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	SNX30	Q5VWJ9	437 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	SWSAP1	Q6NVH7	229 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	PATL1	Q86TB9	770 aa	Known RBP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	TREML1	Q86YW5	311 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	METTL13	Q8N6R0	699 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	TMEM105	Q8N8V8	129 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	KREMEN2	Q8NCW0	462 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	NELFB	Q8WX92	580 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	NLRP7	Q8WX94	980 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	SCG3	Q8WXD2	468 aa	Known RBP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	DGCR14	Q96DF8	476 aa	Known RBP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	ZNF274	Q96GC6	653 aa	Predicted RBP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	RIPOR3	Q96MK2	946 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	CHP1	Q99653	195 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	DDX23	Q9BUQ8	820 aa	Known RBP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	POMK	Q9H5K3	350 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	ETNK1	Q9HBU6	452 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	TRPC7	Q9HCX4	862 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	SEL1L	Q9UBV2	794 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	RASAL2	Q9UJF2	1139 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	GPC6	Q9Y625	555 aa	Predicted RBP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	EP300	Q09472	2414 aa	Predicted RBP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	DMXL1	Q9Y485	3027 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	WDR81	Q562E7	1941 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	FRYL	O94915	3013 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535		A0A088AWK7	358 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	SMIM35	A0A1B0GVV1	85 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	ZBTB42	B2RXF5	422 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	FBP2	O00757	339 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	FSCN2	O14926	492 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	CLASP2	O75122	1294 aa	Known RBP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	TBCA	O75347	108 aa	Known RBP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	LIFR	P42702	1097 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	MATR3	P43243	847 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	METAP2	P50579	478 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	CLCN3	P51790	818 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	TNNC1	P63316	161 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	PLCB3	Q01970	1234 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	TBL3	Q12788	808 aa	Known RBP	7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	KCNC3	Q14003	757 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	GIT2	Q14161	759 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	GRM2	Q14416	872 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	ZCWPW2	Q504Y3	356 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	XRRA1	Q6P2D8	792 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	KLHL35	Q6PF15	583 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	LRRC74B	Q6ZQY2	392 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	NLRP9	Q7RTR0	991 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	TMC7	Q7Z402	723 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	CABP7	Q86V35	215 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	PALB2	Q86YC2	1186 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	LSMEM2	Q8N112	164 aa		7.32	□□□□□ -1.24
CACNB4-256	ENST00000637535	CYP4X1	Q8N118	509 aa		7.32	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms