RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 RHOBTB1O94844 696 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 RPN1P04843 607 aaKnown RBP19.59■□□□□ 0.73
CLN6-220ENST00000637450 MYL1P05976 194 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 ADRB1P08588 477 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 PFKFB1P16118 471 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 EIF2DP41214 584 aaKnown RBP19.59■□□□□ 0.73
CLN6-220ENST00000637450 DGKEP52429 567 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 SLC5A3P53794 718 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 ZACNQ401N2 412 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 SCARA5Q6ZMJ2 495 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 FUKQ8N0W3 1084 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 CRYBG2Q8N1P7 616 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 TMC2Q8TDI7 906 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 SMARCD1Q96GM5 515 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 ZFRQ96KR1 1074 aaKnown RBP19.59■□□□□ 0.73
CLN6-220ENST00000637450 DMAP1Q9NPF5 467 aaPredicted RBP19.59■□□□□ 0.73
CLN6-220ENST00000637450 RXFP3Q9NSD7 469 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 COMMD8Q9NX08 183 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 TBC1D14Q9P2M4 693 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 USP25Q9UHP3 1055 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 HPSEQ9Y251 543 aa19.59■□□□□ 0.73
CLN6-220ENST00000637450 E2F8A0AVK6 867 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 FAM92AA1XBS5 289 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 IKBKBO14920 756 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 AP1G2O75843 785 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 CLSTN1O94985 981 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 NR3C1P04150 777 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 ZDHHC11BP0C7U3 371 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 P4HA1P13674 534 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 MPLP40238 635 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 MRPS21P82921 87 aaKnown RBP19.58■□□□□ 0.72
CLN6-220ENST00000637450 MESP2Q0VG99 397 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 ELF2Q15723 593 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 HECTD3Q5T447 861 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 SV2AQ7L0J3 742 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 ACOT1Q86TX2 421 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 RASSF3Q86WH2 238 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 DDX1Q92499 740 aaKnown RBP19.58■□□□□ 0.72
CLN6-220ENST00000637450 TAF4BQ92750 862 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 CNTNAP3BQ96NU0 1288 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 PNKPQ96T60 521 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 CNTNAP3Q9BZ76 1288 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 SMOC1Q9H4F8 434 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 VPS45Q9NRW7 570 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 MMP17Q9ULZ9 603 aa19.58■□□□□ 0.72
CLN6-220ENST00000637450 ACACBO00763 2458 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 TM4SF5O14894 197 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 KAT7O95251 611 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 ADH1CP00326 375 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 TUBP50607 506 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 CRY1Q16526 586 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 USP39Q53GS9 565 aaKnown RBP19.57■□□□□ 0.72
CLN6-220ENST00000637450 C1orf220Q5T0J3 134 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 IL31Q6EBC2 164 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 CCDC33Q8N5R6 958 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 ZMIZ2Q8NF64 920 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 OTUB2Q96DC9 234 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 SMOQ99835 787 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 CCSER2Q9H7U1 834 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 TRAF3IP3Q9Y228 551 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 RALGAPA1Q6GYQ0 2036 aa19.57■□□□□ 0.72
CLN6-220ENST00000637450 SPAG17Q6Q759 2223 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 EPG5Q9HCE0 2579 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 BEST1O76090 585 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 ASS1P00966 412 aaKnown RBP19.56■□□□□ 0.72
CLN6-220ENST00000637450 CHRM1P11229 460 aaPredicted RBP19.56■□□□□ 0.72
CLN6-220ENST00000637450 ADH5P11766 374 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 NDST1P52848 882 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 LY6G5CQ5SRR4 150 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 UNC93AQ86WB7 457 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 C12orf40Q86WS4 652 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 SFTPA1Q8IWL2 248 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 SLC2A14Q8TDB8 520 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 CNOT6LQ96LI5 555 aaKnown RBP19.56■□□□□ 0.72
CLN6-220ENST00000637450 DUSP9Q99956 384 aaKnown RBP19.56■□□□□ 0.72
CLN6-220ENST00000637450 TPSD1Q9BZJ3 242 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 CSNK1G1Q9HCP0 422 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 KRT82Q9NSB4 513 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 GMIPQ9P107 970 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 INVSQ9Y283 1065 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 FRMD4BQ9Y2L6 1034 aa19.56■□□□□ 0.72
CLN6-220ENST00000637450 CNOT1A5YKK6 2376 aaKnown RBP19.56■□□□□ 0.72
CLN6-220ENST00000637450 LAMA1P25391 3075 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 BCLAF3A2AJT9 711 aaKnown RBP19.55■□□□□ 0.72
CLN6-220ENST00000637450 MAPK13O15264 365 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 CALUO43852 315 aaPredicted RBP19.55■□□□□ 0.72
CLN6-220ENST00000637450 APODP05090 189 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 CCDC130P13994 396 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 GRIA2P42262 883 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 TNFRSF4P43489 277 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 ASPAP45381 313 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 GAD2Q05329 585 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 ORC1Q13415 861 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 HSF5Q4G112 596 aaPredicted RBP19.55■□□□□ 0.72
CLN6-220ENST00000637450 STPG1Q5TH74 334 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 CEP135Q66GS9 1140 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 SPOPLQ6IQ16 392 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 ANO7Q6IWH7 933 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 TMEM92Q6UXU6 159 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 C11orf74Q86VG3 221 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms