RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 MANSC1Q9H8J5 431 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 RAVER2Q9HCJ3 691 aaKnown RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 PRDM5Q9NQX1 630 aaPredicted RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 PXMP2Q9NR77 195 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 RNF146Q9NTX7 359 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 ASNSD1Q9NWL6 643 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 ZFATQ9P243 1243 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 SUN2Q9UH99 717 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 CHORDC1Q9UHD1 332 aaPredicted RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 GGT7Q9UJ14 662 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 MYLKQ15746 1914 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 SLC15A5A6NIM6 579 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 A8MXQ7 604 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 C19orf81C9J6K1 198 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 STK10O94804 968 aaKnown RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 BAIAP3O94812 1187 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 ASMTLO95671 621 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 FGBP02675 491 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 FAM200BP0CF97 657 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 PECAM1P16284 738 aaPredicted RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 STIP1P31948 543 aaKnown RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 DPP6P42658 865 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 SERPINB9P50453 376 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 CCNG1P51959 295 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 OAZ1P54368 228 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 ROR1Q01973 937 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 PRKCEQ02156 737 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 GHRHRQ02643 423 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 ADCY1Q08828 1119 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 TFDP1Q14186 410 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 DUOXA2Q1HG44 320 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 MTERF2Q49AM1 385 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 DAB2IPQ5VWQ8 1189 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 AP1ARQ63HQ0 302 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 CAPN12Q6ZSI9 719 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 ECHDC2Q86YB7 292 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 WDR49Q8IV35 697 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 C4orf33Q8N1A6 199 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 FITM2Q8N6M3 262 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 PRMT6Q96LA8 375 aaPredicted RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 GBP5Q96PP8 586 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 SH3GL3Q99963 347 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 MRPL4Q9BYD3 311 aaKnown RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 GCOM2Q9BZD3 368 aaPredicted RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 KLC2Q9H0B6 622 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 MMADHCQ9H3L0 296 aaPredicted RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 RSAD1Q9HA92 442 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 GPRC5CQ9NQ84 441 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 TOPORSQ9NS56 1045 aaPredicted RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 TMEM39AQ9NV64 488 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 BCAP29Q9UHQ4 241 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 SLC4A7Q9Y6M7 1214 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 A0A0G2JND7 137 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 TISP43B9A030 160 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 SPECC1L-ADORA2AF8WAN1 911 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 STRNO43815 780 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 GAS2O43903 313 aaKnown RBP4.15□□□□□ -1.75
SCN1A-214ENST00000637038 PEX14O75381 377 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 NR3C2P08235 984 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 HARSP12081 509 aaKnown RBP4.15□□□□□ -1.75
SCN1A-214ENST00000637038 TARSP26639 723 aaKnown RBP4.15□□□□□ -1.75
SCN1A-214ENST00000637038 RPS6P62753 249 aaKnown RBP4.15□□□□□ -1.75
SCN1A-214ENST00000637038 BASP1P80723 227 aaKnown RBP4.15□□□□□ -1.75
SCN1A-214ENST00000637038 ZNF200P98182 395 aaPredicted RBP4.15□□□□□ -1.75
SCN1A-214ENST00000637038 KRT81Q14533 505 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 CCDC14Q49A88 953 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 EFHC2Q5JST6 749 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 SWSAP1Q6NVH7 229 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 IRGCQ6NXR0 463 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 TLDC1Q6P9B6 456 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 DARS2Q6PI48 645 aaKnown RBP4.15□□□□□ -1.75
SCN1A-214ENST00000637038 C17orf99Q6UX52 265 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 BZW1Q7L1Q6 419 aaKnown RBP4.15□□□□□ -1.75
SCN1A-214ENST00000637038 RHPN2Q8IUC4 686 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 CRLF3Q8IUI8 442 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.15□□□□□ -1.75
SCN1A-214ENST00000637038 SCYL3Q8IZE3 742 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 ZNF75CPQ92670 426 aaPredicted RBP4.15□□□□□ -1.75
SCN1A-214ENST00000637038 MTBPQ96DY7 904 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 MCEEQ96PE7 176 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 TAAR1Q96RJ0 339 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 TSC22D3Q99576 134 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 SIKE1Q9BRV8 207 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 PI4K2AQ9BTU6 479 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 PPP1R12CQ9BZL4 782 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 ACSS3Q9H6R3 686 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 NPHS2Q9NP85 383 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 ZNF302Q9NR11 478 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 AAASQ9NRG9 546 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 PAK5Q9P286 719 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 LNPEPQ9UIQ6 1025 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 CDV3Q9UKY7 258 aaKnown RBP4.15□□□□□ -1.75
SCN1A-214ENST00000637038 AGAP1Q9UPQ3 857 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 L3MBTL1Q9Y468 752 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 PCDHAC2Q9Y5I4 1007 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 PLXNB2O15031 1838 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 H7C0C1 242 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 NFIBO00712 420 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 KIAA0355O15063 1070 aa4.15□□□□□ -1.75
SCN1A-214ENST00000637038 SMIM24O75264 130 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms