RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 NKIRAS1Q9NYS0 192 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 A8MXQ7 604 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 TREHO43280 583 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 PRPSAP2O60256 369 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 CA4P22748 312 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 PRPF39Q86UA1 669 aaKnown RBP19.72■□□□□ 0.75
CLN5-216ENST00000636780 CNPY4Q8N129 248 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 TINF2Q9BSI4 451 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 SLC5A4Q9NY91 659 aa19.72■□□□□ 0.75
CLN5-216ENST00000636780 DICER1Q9UPY3 1922 aaKnown RBP19.72■□□□□ 0.75
CLN5-216ENST00000636780 GRIA1P42261 906 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 LCLAT1Q6UWP7 414 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 FITM2Q8N6M3 262 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 ANKS4BQ8N8V4 417 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 PCDH19Q8TAB3 1148 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 P3H4Q92791 437 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 NFKBIZQ9BYH8 718 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 TRIM6Q9C030 488 aaPredicted RBP19.71■□□□□ 0.75
CLN5-216ENST00000636780 ADAMTS10Q9H324 1103 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 RAB6BQ9NRW1 208 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 ASNSD1Q9NWL6 643 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 LGALS13Q9UHV8 139 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 PIN4Q9Y237 131 aaKnown RBP19.71■□□□□ 0.75
CLN5-216ENST00000636780 BPTFQ12830 3046 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 CHRM1P11229 460 aaPredicted RBP19.71■□□□□ 0.75
CLN5-216ENST00000636780 KCNJ2P63252 427 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 PALM2Q8IXS6 379 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 PPIL6Q8IXY8 311 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 PQLC3Q8N755 202 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 CCDC63Q8NA47 563 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 ARRDC4Q8NCT1 418 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 CFAP36Q96G28 342 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 SNRNP25Q9BV90 132 aaKnown RBP19.71■□□□□ 0.75
CLN5-216ENST00000636780 GBA2Q9HCG7 927 aaPredicted RBP19.71■□□□□ 0.75
CLN5-216ENST00000636780 VTA1Q9NP79 307 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 PPME1Q9Y570 386 aa19.71■□□□□ 0.75
CLN5-216ENST00000636780 FAM47DPA6NHR8 397 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 MCF2LO15068 1137 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 GPR32O75388 356 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 SMIM10L2AP0DMW4 78 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 SMIM10L2BP0DMW5 78 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 GABRB2P47870 512 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 CCNA1P78396 465 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 GBE1Q04446 702 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 OLFML1Q6UWY5 402 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 PLD5Q8N7P1 536 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.7■□□□□ 0.74
CLN5-216ENST00000636780 CNPY3Q9BT09 278 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 ETNK2Q9NVF9 386 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 SLC17A7Q9P2U7 560 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 USP15Q9Y4E8 981 aaPredicted RBP19.7■□□□□ 0.74
CLN5-216ENST00000636780 APOC4-APOC2K7ER74 178 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 UGT1A9O60656 530 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 APOC2P02655 101 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 CYP2C9P11712 490 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 HDAC4P56524 1084 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 SLC20A2Q08357 652 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 OVGP1Q12889 678 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 SLC10A2Q12908 348 aaPredicted RBP19.7■□□□□ 0.74
CLN5-216ENST00000636780 DUSP28Q4G0W2 176 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 OLFML2BQ68BL8 750 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 ANKLE1Q8NAG6 615 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 ZFP42Q96MM3 310 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 CCDC134Q9H6E4 229 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 UGT1A7Q9HAW7 530 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 UGT1A10Q9HAW8 530 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 UGT1A8Q9HAW9 530 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 ITGA11Q9UKX5 1188 aa19.7■□□□□ 0.74
CLN5-216ENST00000636780 F7P08709 466 aaPredicted RBP19.69■□□□□ 0.74
CLN5-216ENST00000636780 MNAT1P51948 309 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 INCA1Q0VD86 236 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 DGKDQ16760 1214 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 CROCCP2Q86T23 111 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 TP53INP2Q8IXH6 220 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 FUKQ8N0W3 1084 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 PAFAH2Q99487 392 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 PITPNM3Q9BZ71 974 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 KLC4Q9NSK0 619 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 A8MUI8 341 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 TCEA3O75764 348 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 BEST1O76090 585 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 P4HA1P13674 534 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 ADRA1DP25100 572 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 ATICP31939 592 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 ROR1Q01973 937 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 PPP1R2P3Q6NXS1 205 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 SPATA21Q7Z572 469 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 PNMA8AQ86V59 439 aaPredicted RBP19.69■□□□□ 0.74
CLN5-216ENST00000636780 SHCBP1Q8NEM2 672 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 FNIP1Q8TF40 1166 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 FAF2Q96CS3 445 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 RNF157Q96PX1 679 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 DHX35Q9H5Z1 703 aaKnown RBP19.69■□□□□ 0.74
CLN5-216ENST00000636780 CYP3A43Q9HB55 503 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 TIMM13Q9Y5L4 95 aaPredicted RBP19.69■□□□□ 0.74
CLN5-216ENST00000636780 KBTBD13C9JR72 458 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 RASSF9O75901 435 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 APRTP07741 180 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 NDUFV1P49821 464 aa19.69■□□□□ 0.74
CLN5-216ENST00000636780 YWHAGP61981 247 aaKnown RBP eCLIP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms