RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 COL6A3P12111 3177 aa11.21□□□□□ -0.61
CLN5-213ENST00000636681 SLC38A8A6NNN8 435 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 TMEM110-MUSTN1A8MSY1 372 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 FANCGO15287 622 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 CCL16O15467 120 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 GLUD1P00367 558 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 CYP1A2P05177 515 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 FYNP06241 537 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 C8AP07357 584 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 TMEM253P0C7T8 217 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 RFC1P35251 1148 aaPredicted RBP11.21□□□□□ -0.62
CLN5-213ENST00000636681 FLT3P36888 993 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 MAGEA11P43364 429 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 GPC5P78333 572 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 MAMLD1Q13495 774 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 PPP1R15BQ5SWA1 713 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 FAM102AQ5T9C2 384 aaPredicted RBP11.21□□□□□ -0.62
CLN5-213ENST00000636681 SH3PXD2AQ5TCZ1 1133 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 TPGS2Q68CL5 300 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 VSTM1Q6UX27 236 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 TCEAL8Q8IYN2 117 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 HS6ST3Q8IZP7 471 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 STK32AQ8WU08 396 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 CTNNBL1Q8WYA6 563 aaPredicted RBP11.21□□□□□ -0.62
CLN5-213ENST00000636681 KCTD13Q8WZ19 329 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 C8orf48Q96LL4 319 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 MCEEQ96PE7 176 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 APOL5Q9BWW9 433 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 EMILIN2Q9BXX0 1053 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 TLE6Q9H808 572 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 LRRC4Q9HBW1 653 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 ABCB6Q9NP58 842 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 MAN1C1Q9NR34 630 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 OSER1Q9NX31 292 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 CTTNBP2NLQ9P2B4 639 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 HCFC2Q9Y5Z7 792 aa11.21□□□□□ -0.62
CLN5-213ENST00000636681 NCANO14594 1321 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 ATP8B3O60423 1300 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 IPO7O95373 1038 aaKnown RBP11.2□□□□□ -0.62
CLN5-213ENST00000636681 HMGA1P17096 107 aaKnown RBP11.2□□□□□ -0.62
CLN5-213ENST00000636681 ELF1P32519 619 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 DAOAP59103 153 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 PLD1Q13393 1074 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 TCEAL5Q5H9L2 206 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 PLEKHA7Q6IQ23 1121 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 SCD5Q86SK9 330 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 GPR65Q8IYL9 337 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 NUP93Q8N1F7 819 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 EDEM1Q92611 657 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 MRPL38Q96DV4 380 aaKnown RBP11.2□□□□□ -0.62
CLN5-213ENST00000636681 HSFY1Q96LI6 401 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 OXCT2Q9BYC2 517 aaPredicted RBP11.2□□□□□ -0.62
CLN5-213ENST00000636681 DNAI2Q9GZS0 605 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 GMIPQ9P107 970 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 CALCOCO1Q9P1Z2 691 aa11.2□□□□□ -0.62
CLN5-213ENST00000636681 GLP2RO95838 553 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 ZBED1O96006 694 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 CALB1P05937 261 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 TCF4P15884 667 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 GJA1P17302 382 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 NOP2P46087 812 aaKnown RBP11.19□□□□□ -0.62
CLN5-213ENST00000636681 ATXN1P54253 815 aaKnown RBP11.19□□□□□ -0.62
CLN5-213ENST00000636681 SLC8A3P57103 927 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 NTHL1P78549 312 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 MRPS5P82675 430 aaKnown RBP11.19□□□□□ -0.62
CLN5-213ENST00000636681 SLC6A3Q01959 620 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 HYAL1Q12794 435 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 KIF5AQ12840 1032 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 C15orf59Q2T9L4 293 aaPredicted RBP11.19□□□□□ -0.62
CLN5-213ENST00000636681 PRPF38BQ5VTL8 546 aaKnown RBP11.19□□□□□ -0.62
CLN5-213ENST00000636681 SYPL2Q5VXT5 272 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 DNAJC24Q6P3W2 148 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 DENND5BQ6ZUT9 1274 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 SIX6OS1Q8N1H7 587 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 C3orf20Q8ND61 904 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 ZNF564Q8TBZ8 553 aaPredicted RBP11.19□□□□□ -0.62
CLN5-213ENST00000636681 IPO4Q8TEX9 1081 aaKnown RBP11.19□□□□□ -0.62
CLN5-213ENST00000636681 C2orf15Q8WU43 125 aaKnown RBP11.19□□□□□ -0.62
CLN5-213ENST00000636681 FAM149B1Q96BN6 582 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 NOX5Q96PH1 765 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 TMEM59LQ9UK28 342 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 SSX2IPQ9Y2D8 614 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 USP3Q9Y6I4 520 aa11.19□□□□□ -0.62
CLN5-213ENST00000636681 A0A1W2PQH9 124 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 TRIM66O15016 1216 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 MDM4O15151 490 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 BUB1BO60566 1050 aaPredicted RBP11.18□□□□□ -0.62
CLN5-213ENST00000636681 CREMQ03060 361 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 TAF10Q12962 218 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 ZNF268Q14587 947 aaPredicted RBP11.18□□□□□ -0.62
CLN5-213ENST00000636681 DUSP6Q16828 381 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 ARHGAP29Q52LW3 1261 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 C10orf76Q5T2E6 689 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 LIN9Q5TKA1 542 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 SMYD5Q6GMV2 418 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 POTEHQ6S545 545 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 DNAJB7Q7Z6W7 309 aaPredicted RBP11.18□□□□□ -0.62
CLN5-213ENST00000636681 ZSCAN30Q86W11 494 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 MICALL1Q8N3F8 863 aa11.18□□□□□ -0.62
CLN5-213ENST00000636681 ADAM32Q8TC27 787 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms