RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 LCE1AQ5T7P2 110 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 STRIP1Q5VSL9 837 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 AGAP9Q5VTM2 703 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 MZT2AQ6P582 158 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 FOXR2Q6PJQ5 311 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 TMEM108Q6UXF1 575 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 RHOUQ7L0Q8 258 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 CCDC117Q8IWD4 279 aaPredicted RBP5.02□□□□□ -1.61
CLN5-212ENST00000636602 SPARTQ8N0X7 666 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 NAXEQ8NCW5 288 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 IL17REQ8NFR9 667 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 OR56A1Q8NGH5 318 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 POC1BQ8TC44 478 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 OTUD7AQ8TE49 926 aaPredicted RBP5.02□□□□□ -1.61
CLN5-212ENST00000636602 SLC25A43Q8WUT9 341 aaPredicted RBP5.02□□□□□ -1.61
CLN5-212ENST00000636602 LENG9Q96B70 501 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 MIEF2Q96C03 454 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 GRAMD1AQ96CP6 724 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 LRIG1Q96JA1 1093 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 NEU1Q99519 415 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 SLC25A32Q9H2D1 315 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 RNPEPQ9H4A4 650 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 ZHX3Q9H4I2 956 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 EPS8L2Q9H6S3 715 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 SAYSD1Q9NPB0 183 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 VPS45Q9NRW7 570 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 VSX1Q9NZR4 365 aaPredicted RBP5.02□□□□□ -1.61
CLN5-212ENST00000636602 KIF17Q9P2E2 1029 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 PDP2Q9P2J9 529 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 HSFX1Q9UBD0 423 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 SRP68Q9UHB9 627 aaKnown RBP5.02□□□□□ -1.61
CLN5-212ENST00000636602 MRPS17Q9Y2R5 130 aaKnown RBP5.02□□□□□ -1.61
CLN5-212ENST00000636602 CRYL1Q9Y2S2 319 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 USP15Q9Y4E8 981 aaPredicted RBP5.02□□□□□ -1.61
CLN5-212ENST00000636602 DTNAQ9Y4J8 743 aa5.02□□□□□ -1.61
CLN5-212ENST00000636602 A0A1B0GTW7 788 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 A0A1B0GVC2 190 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 DNPH1O43598 174 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 CCNT2O60583 730 aaKnown RBP5.01□□□□□ -1.61
CLN5-212ENST00000636602 ERN1O75460 977 aaKnown RBP5.01□□□□□ -1.61
CLN5-212ENST00000636602 KCNA3P22001 575 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 CNTFP26441 200 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 APOBEC3AP31941 199 aaPredicted RBP5.01□□□□□ -1.61
CLN5-212ENST00000636602 DDIT3P35638 169 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 DGKEP52429 567 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 GEMIN4P57678 1058 aaKnown RBP5.01□□□□□ -1.61
CLN5-212ENST00000636602 RNASE9P60153 205 aaKnown RBP5.01□□□□□ -1.61
CLN5-212ENST00000636602 HSD11B2P80365 405 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 MC2RQ01718 297 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 MYO1EQ12965 1108 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 GPS1Q13098 491 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 PREPLQ4J6C6 727 aaPredicted RBP5.01□□□□□ -1.61
CLN5-212ENST00000636602 FBXO47Q5MNV8 452 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 FAM102AQ5T9C2 384 aaPredicted RBP5.01□□□□□ -1.61
CLN5-212ENST00000636602 MANEALQ5VSG8 457 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 CLEC4GQ6UXB4 293 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 MAATS1Q7Z4T9 603 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 C2CD5Q86YS7 1000 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 RASGRP3Q8IV61 690 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 FTSJ3Q8IY81 847 aaKnown RBP5.01□□□□□ -1.61
CLN5-212ENST00000636602 PPHLN1Q8NEY8 458 aaKnown RBP5.01□□□□□ -1.61
CLN5-212ENST00000636602 OR1N1Q8NGS0 311 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 DNAJB14Q8TBM8 379 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 RILPL2Q969X0 211 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 SENP7Q9BQF6 1050 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 ZSWIM1Q9BR11 485 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 PYM1Q9BRP8 204 aaKnown RBP5.01□□□□□ -1.61
CLN5-212ENST00000636602 RTKNQ9BST9 563 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 SYNPO2LQ9H987 977 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 GJD2Q9UKL4 321 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 CA14Q9ULX7 337 aa5.01□□□□□ -1.61
CLN5-212ENST00000636602 CCDC78A2IDD5 438 aa5□□□□□ -1.61
CLN5-212ENST00000636602 GRID2IPA4D2P6 1211 aa5□□□□□ -1.61
CLN5-212ENST00000636602 J3KRW8 73 aa5□□□□□ -1.61
CLN5-212ENST00000636602 PCDH17O14917 1159 aa5□□□□□ -1.61
CLN5-212ENST00000636602 SOAT2O75908 522 aa5□□□□□ -1.61
CLN5-212ENST00000636602 SUN1O94901 812 aa5□□□□□ -1.61
CLN5-212ENST00000636602 GPANK1O95872 356 aa5□□□□□ -1.61
CLN5-212ENST00000636602 VIPP01282 170 aa5□□□□□ -1.61
CLN5-212ENST00000636602 POLBP06746 335 aa5□□□□□ -1.61
CLN5-212ENST00000636602 CKMT1AP12532 417 aa5□□□□□ -1.61
CLN5-212ENST00000636602 KCNA2P16389 499 aa5□□□□□ -1.61
CLN5-212ENST00000636602 FGFR4P22455 802 aa5□□□□□ -1.61
CLN5-212ENST00000636602 CST5P28325 142 aaPredicted RBP5□□□□□ -1.61
CLN5-212ENST00000636602 PNLIPRP1P54315 467 aa5□□□□□ -1.61
CLN5-212ENST00000636602 AP2B1P63010 937 aa5□□□□□ -1.61
CLN5-212ENST00000636602 DDX10Q13206 875 aaKnown RBP5□□□□□ -1.61
CLN5-212ENST00000636602 SIM2Q14190 667 aaPredicted RBP5□□□□□ -1.61
CLN5-212ENST00000636602 TRIM71Q2Q1W2 868 aaKnown RBP5□□□□□ -1.61
CLN5-212ENST00000636602 PTCHD3Q3KNS1 767 aa5□□□□□ -1.61
CLN5-212ENST00000636602 ATPAF1Q5TC12 328 aaPredicted RBP5□□□□□ -1.61
CLN5-212ENST00000636602 ARHGAP40Q5TG30 622 aa5□□□□□ -1.61
CLN5-212ENST00000636602 C1QL3Q5VWW1 255 aa5□□□□□ -1.61
CLN5-212ENST00000636602 METRNLQ641Q3 311 aa5□□□□□ -1.61
CLN5-212ENST00000636602 RGS7BPQ6MZT1 257 aaPredicted RBP5□□□□□ -1.61
CLN5-212ENST00000636602 OLFML1Q6UWY5 402 aa5□□□□□ -1.61
CLN5-212ENST00000636602 LRRTM4Q86VH4 590 aa5□□□□□ -1.61
CLN5-212ENST00000636602 CPT1CQ8TCG5 803 aa5□□□□□ -1.61
CLN5-212ENST00000636602 SPPL3Q8TCT6 385 aa5□□□□□ -1.61
CLN5-212ENST00000636602 SKA1Q96BD8 255 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms