RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 LINC00597Q9H2U6 94 aa20.07■□□□□ 0.8
CLN6-213ENST00000636212 CFAP97Q9P2B7 532 aa20.07■□□□□ 0.8
CLN6-213ENST00000636212 TBC1D14Q9P2M4 693 aa20.07■□□□□ 0.8
CLN6-213ENST00000636212 HMGXB4Q9UGU5 601 aa20.07■□□□□ 0.8
CLN6-213ENST00000636212 PCDHA5Q9Y5H7 936 aa20.07■□□□□ 0.8
CLN6-213ENST00000636212 TNFRSF10BO14763 440 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 RNF40O75150 1001 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 EGFP01133 1207 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 HOXA6P31267 233 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 ID4P47928 161 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 TUBP50607 506 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 LRRC63Q05C16 580 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 SIM2Q14190 667 aaPredicted RBP20.06■□□□□ 0.8
CLN6-213ENST00000636212 DCAF17Q5H9S7 520 aaPredicted RBP20.06■□□□□ 0.8
CLN6-213ENST00000636212 FILIP1Q7Z7B0 1213 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 C12orf29Q8N999 325 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 EEF2KMTQ96G04 330 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 HNRNPABQ99729 332 aaKnown RBP20.06■□□□□ 0.8
CLN6-213ENST00000636212 SMOQ99835 787 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 APOBEC3GQ9HC16 384 aaKnown RBP20.06■□□□□ 0.8
CLN6-213ENST00000636212 CSNK1G1Q9HCP0 422 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 TLR8Q9NR97 1041 aaKnown RBP20.06■□□□□ 0.8
CLN6-213ENST00000636212 RAB20Q9NX57 234 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 SH3BP1Q9Y3L3 701 aa20.06■□□□□ 0.8
CLN6-213ENST00000636212 K7ESF4 209 aa20.05■□□□□ 0.8
CLN6-213ENST00000636212 PSMA7O14818 248 aa20.05■□□□□ 0.8
CLN6-213ENST00000636212 CILPO75339 1184 aa20.05■□□□□ 0.8
CLN6-213ENST00000636212 SNX30Q5VWJ9 437 aa20.05■□□□□ 0.8
CLN6-213ENST00000636212 LAIR1Q6GTX8 287 aa20.05■□□□□ 0.8
CLN6-213ENST00000636212 CEP68Q76N32 757 aa20.05■□□□□ 0.8
CLN6-213ENST00000636212 DCLK2Q8N568 766 aa20.05■□□□□ 0.8
CLN6-213ENST00000636212 ACDQ96AP0 544 aa20.05■□□□□ 0.8
CLN6-213ENST00000636212 IL37Q9NZH6 218 aa20.05■□□□□ 0.8
CLN6-213ENST00000636212 GMIPQ9P107 970 aa20.05■□□□□ 0.8
CLN6-213ENST00000636212 MYO15AQ9UKN7 3530 aa20.04■□□□□ 0.8
CLN6-213ENST00000636212 E2F8A0AVK6 867 aa20.04■□□□□ 0.8
CLN6-213ENST00000636212 COCHO43405 550 aa20.04■□□□□ 0.8
CLN6-213ENST00000636212 ADH1CP00326 375 aa20.04■□□□□ 0.8
CLN6-213ENST00000636212 ZXDBP98169 803 aa20.04■□□□□ 0.8
CLN6-213ENST00000636212 GOLGA8FQ08AF8 430 aa20.04■□□□□ 0.8
CLN6-213ENST00000636212 GOLGA8DPQ0D2H9 430 aa20.04■□□□□ 0.8
CLN6-213ENST00000636212 WDR5BQ86VZ2 330 aa20.04■□□□□ 0.8
CLN6-213ENST00000636212 ELOA2Q8IYF1 753 aaPredicted RBP20.04■□□□□ 0.8
CLN6-213ENST00000636212 ZMIZ2Q8NF64 920 aa20.04■□□□□ 0.8
CLN6-213ENST00000636212 JAKMIP2Q96AA8 810 aa20.04■□□□□ 0.8
CLN6-213ENST00000636212 OTUB2Q96DC9 234 aa20.04■□□□□ 0.8
CLN6-213ENST00000636212 FAM124BQ9H5Z6 455 aaPredicted RBP20.04■□□□□ 0.8
CLN6-213ENST00000636212 PNPLA8Q9NP80 782 aa20.04■□□□□ 0.8
CLN6-213ENST00000636212 ARMCX3Q9UH62 379 aaPredicted RBP20.04■□□□□ 0.8
CLN6-213ENST00000636212 FAM92AA1XBS5 289 aa20.03■□□□□ 0.8
CLN6-213ENST00000636212 SLC8A3P57103 927 aa20.03■□□□□ 0.8
CLN6-213ENST00000636212 MCCD1P59942 119 aaPredicted RBP20.03■□□□□ 0.8
CLN6-213ENST00000636212 ANKRD40Q6AI12 368 aa20.03■□□□□ 0.8
CLN6-213ENST00000636212 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.03■□□□□ 0.8
CLN6-213ENST00000636212 ADGRG2Q8IZP9 1017 aa20.03■□□□□ 0.8
CLN6-213ENST00000636212 CAMKK1Q8N5S9 505 aa20.03■□□□□ 0.8
CLN6-213ENST00000636212 RPLP0P6Q8NHW5 317 aa20.03■□□□□ 0.8
CLN6-213ENST00000636212 SPATA20Q8TB22 786 aa20.03■□□□□ 0.8
CLN6-213ENST00000636212 ERCC4Q92889 916 aaPredicted RBP20.03■□□□□ 0.8
CLN6-213ENST00000636212 DHTKD1Q96HY7 919 aaPredicted RBP20.03■□□□□ 0.8
CLN6-213ENST00000636212 HEXIM2Q96MH2 286 aaKnown RBP20.03■□□□□ 0.8
CLN6-213ENST00000636212 TWNKQ96RR1 684 aa20.03■□□□□ 0.8
CLN6-213ENST00000636212 CCSER2Q9H7U1 834 aa20.03■□□□□ 0.8
CLN6-213ENST00000636212 METTL14Q9HCE5 456 aaKnown RBP20.03■□□□□ 0.8
CLN6-213ENST00000636212 FBRSL1Q9HCM7 1045 aaKnown RBP20.03■□□□□ 0.8
CLN6-213ENST00000636212 CCDC163A0A0D9SF12 145 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 BEST1O76090 585 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 CYP17A1P05093 508 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 ZDHHC11BP0C7U3 371 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 ACO1P21399 889 aaKnown RBP20.02■□□□□ 0.8
CLN6-213ENST00000636212 YWHAEP62258 255 aaKnown RBP20.02■□□□□ 0.8
CLN6-213ENST00000636212 DMWDQ09019 674 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 DHCR24Q15392 516 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 LPAL2Q16609 132 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 ZNF394Q53GI3 561 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 BTBD8Q5XKL5 378 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 CLEC20AQ6ZU45 233 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 TADA2BQ86TJ2 420 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 USP18Q9UMW8 372 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 SCML2Q9UQR0 700 aa20.02■□□□□ 0.8
CLN6-213ENST00000636212 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.01■□□□□ 0.79
CLN6-213ENST00000636212 TLR5O60602 858 aa20.01■□□□□ 0.79
CLN6-213ENST00000636212 SDHBP21912 280 aa20.01■□□□□ 0.79
CLN6-213ENST00000636212 ATP5C1P36542 298 aaKnown RBP20.01■□□□□ 0.79
CLN6-213ENST00000636212 PREPLQ4J6C6 727 aaPredicted RBP20.01■□□□□ 0.79
CLN6-213ENST00000636212 PKN3Q6P5Z2 889 aa20.01■□□□□ 0.79
CLN6-213ENST00000636212 SEMA4DQ92854 862 aa20.01■□□□□ 0.79
CLN6-213ENST00000636212 TMEM176AQ96HP8 235 aa20.01■□□□□ 0.79
CLN6-213ENST00000636212 PNKPQ96T60 521 aa20.01■□□□□ 0.79
CLN6-213ENST00000636212 DUSP16Q9BY84 665 aa20.01■□□□□ 0.79
CLN6-213ENST00000636212 CISHQ9NSE2 258 aa20.01■□□□□ 0.79
CLN6-213ENST00000636212 C2orf42Q9NWW7 574 aa20.01■□□□□ 0.79
CLN6-213ENST00000636212 LSM7Q9UK45 103 aaKnown RBP20.01■□□□□ 0.79
CLN6-213ENST00000636212 FAM186AA6NE01 2351 aa20.01■□□□□ 0.79
CLN6-213ENST00000636212 VPS13AQ96RL7 3174 aa20.01■□□□□ 0.79
CLN6-213ENST00000636212 PTPRZ1P23471 2315 aaPredicted RBP20.01■□□□□ 0.79
CLN6-213ENST00000636212 BICDL2A1A5D9 508 aa20■□□□□ 0.79
CLN6-213ENST00000636212 HRO43593 1189 aa20■□□□□ 0.79
CLN6-213ENST00000636212 APODP05090 189 aa20■□□□□ 0.79
CLN6-213ENST00000636212 RETP07949 1114 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms