RNA–Protein interactions for RNA: ENST00000635137.1

PATJ-215, Transcript of PATJ, crumbs cell polarity complex component, human

TSL 1 (best) BASIC

Gene PATJ, Length 2,298 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PATJ-215	ENST00000635137	STAP1	Q9ULZ2	295 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	USP18	Q9UMW8	372 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	EFR3B	Q9Y2G0	817 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	MYO1C	O00159	1063 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	BEST1	O76090	585 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	NOS2	P35228	1153 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	MATK	P42679	507 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	WDR5	P61964	334 aa	Known RBP	13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	BRD3	Q15059	726 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	SLC39A12	Q504Y0	691 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	UBE2Q1	Q7Z7E8	422 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	MAP7D3	Q8IWC1	876 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	C2orf15	Q8WU43	125 aa	Known RBP	13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	FAM149B1	Q96BN6	582 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	TBCB	Q99426	244 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	DDX23	Q9BUQ8	820 aa	Known RBP	13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	GPR62	Q9BZJ7	368 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	POPDC2	Q9HBU9	364 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	MARCH5	Q9NX47	278 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	SMARCAL1	Q9NZC9	954 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	PCDHB5	Q9Y5E4	795 aa		13.13	□□□□□ -0.31
PATJ-215	ENST00000635137	GRAP2	O75791	330 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	TJP3	O95049	919 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	ZBED1	O96006	694 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	FGB	P02675	491 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	LAG3	P18627	525 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	CHRNA3	P32297	505 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	FLT3	P36888	993 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	GRIK1	P39086	918 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	BTG3	Q14201	252 aa	Predicted RBP	13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	CCDC14	Q49A88	953 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	WDR93	Q6P2C0	686 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	STRADA	Q7RTN6	431 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	LRRTM3	Q86VH5	581 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	C10orf67	Q8IYJ2	551 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	VWCE	Q96DN2	955 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	ZNF558	Q96NG5	402 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	KCNK16	Q96T55	309 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	KRT12	Q99456	494 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	AP1M1	Q9BXS5	423 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	AAAS	Q9NRG9	546 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	RSPH14	Q9UHP6	348 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	ADAM21	Q9UKJ8	722 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	PTPRD	P23468	1912 aa		13.12	□□□□□ -0.31
PATJ-215	ENST00000635137	CAPN9	O14815	690 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	GABBR2	O75899	941 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	KRT1	P04264	644 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	ITGB8	P26012	769 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	MIP	P30301	263 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	PTPN7	P35236	360 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	GJC1	P36383	396 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	MAGEA11	P43364	429 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	TFDP3	Q5H9I0	405 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	CPNE8	Q86YQ8	564 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	SPPL2B	Q8TCT7	592 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	IGSF21	Q96ID5	467 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	OSBPL8	Q9BZF1	889 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	CWH43	Q9H720	699 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	ANKZF1	Q9H8Y5	726 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	RAB21	Q9UL25	225 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	CCDC151	A5D8V7	595 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	DAB1	O75553	588 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	TRUB2	O95900	331 aa	Known RBP	13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	EN2	P19622	333 aa	Predicted RBP	13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	DAOA	P59103	153 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	SLC25A11	Q02978	314 aa	Known RBP	13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	FPGS	Q05932	587 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	DHX34	Q14147	1143 aa	Known RBP	13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	SLC25A52	Q3SY17	297 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	MAP9	Q49MG5	647 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	PM20D1	Q6GTS8	502 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	KIAA1841	Q6NSI8	718 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	KCNT2	Q6UVM3	1135 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	KLHL7	Q8IXQ5	586 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	ZMIZ2	Q8NF64	920 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	FAM172A	Q8WUF8	416 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	TEKT4	Q8WW24	435 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	CENPI	Q92674	756 aa	Predicted RBP	13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	TMEM169	Q96HH4	297 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	CFAP57	Q96MR6	1250 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	LRRC1	Q9BTT6	524 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	NGRN	Q9NPE2	291 aa	Known RBP	13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	STIM2	Q9P246	746 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	VWA8	A3KMH1	1905 aa		13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	MKI67	P46013	3256 aa	Known RBP	13.11	□□□□□ -0.31
PATJ-215	ENST00000635137	NT5C1B-RDH14	C9J2C7	533 aa		13.1	□□□□□ -0.31
PATJ-215	ENST00000635137	PHF2	O75151	1096 aa		13.1	□□□□□ -0.31
PATJ-215	ENST00000635137	CPB1	P15086	417 aa		13.1	□□□□□ -0.31
PATJ-215	ENST00000635137	PPM1A	P35813	382 aa		13.1	□□□□□ -0.31
PATJ-215	ENST00000635137	LMAN1	P49257	510 aa		13.1	□□□□□ -0.31
PATJ-215	ENST00000635137	ATP11A	P98196	1134 aa		13.1	□□□□□ -0.31
PATJ-215	ENST00000635137	ADCY1	Q08828	1119 aa		13.1	□□□□□ -0.31
PATJ-215	ENST00000635137	GPR17	Q13304	367 aa		13.1	□□□□□ -0.31
PATJ-215	ENST00000635137	PDK2	Q15119	407 aa		13.1	□□□□□ -0.31
PATJ-215	ENST00000635137	TAF5	Q15542	800 aa		13.1	□□□□□ -0.31
PATJ-215	ENST00000635137	BEND5	Q7L4P6	421 aa		13.1	□□□□□ -0.31
PATJ-215	ENST00000635137	VSIG1	Q86XK7	387 aa		13.1	□□□□□ -0.31
PATJ-215	ENST00000635137	IFT20	Q8IY31	132 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms