RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 PDGFRBP09619 1106 aa21.47■■□□□ 1.03
TARDBP-228ENST00000629725 HNRNPDQ14103 355 aaKnown RBP21.47■■□□□ 1.03
TARDBP-228ENST00000629725 TRMT11Q7Z4G4 463 aaKnown RBP21.47■■□□□ 1.03
TARDBP-228ENST00000629725 LIMS2Q7Z4I7 341 aa21.47■■□□□ 1.03
TARDBP-228ENST00000629725 RAB44Q7Z6P3 723 aaPredicted RBP21.47■■□□□ 1.03
TARDBP-228ENST00000629725 DDX42Q86XP3 938 aaKnown RBP eCLIP21.47■■□□□ 1.03
TARDBP-228ENST00000629725 SYCP3Q8IZU3 236 aa21.47■■□□□ 1.03
TARDBP-228ENST00000629725 KIF2CQ99661 725 aa21.47■■□□□ 1.03
TARDBP-228ENST00000629725 F8VP50 259 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 ARHGAP33O14559 1287 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 CAPNS1P04632 268 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 MBL2P11226 248 aaPredicted RBP21.46■■□□□ 1.03
TARDBP-228ENST00000629725 ZNF33AQ06730 810 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 TAF10Q12962 218 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 PREPLQ4J6C6 727 aaPredicted RBP21.46■■□□□ 1.03
TARDBP-228ENST00000629725 LY6G5CQ5SRR4 150 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 TDRD10Q5VZ19 366 aaKnown RBP21.46■■□□□ 1.03
TARDBP-228ENST00000629725 PHTF2Q8N3S3 785 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 ZNF513Q8N8E2 541 aaPredicted RBP21.46■■□□□ 1.03
TARDBP-228ENST00000629725 MYCBPAPQ8TBZ2 947 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 KCNV2Q8TDN2 545 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 SLITRK1Q96PX8 696 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 CBWD1Q9BRT8 395 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 PCIF1Q9H4Z3 704 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 PCDHB13Q9Y5F0 798 aa21.46■■□□□ 1.03
TARDBP-228ENST00000629725 SYPP08247 313 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 CD59P13987 128 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 GAP43P17677 238 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 GABRG2P18507 467 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 GJB2P29033 226 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 GAD2Q05329 585 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 BTBD8Q5XKL5 378 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 NUDT18Q6ZVK8 323 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 HS2ST1Q7LGA3 356 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 C8orf48Q96LL4 319 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 MMS19Q96T76 1030 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 INTS13Q9NVM9 706 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 PPP4R2Q9NY27 417 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 CALCOCO1Q9P1Z2 691 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 GPSM3Q9Y4H4 160 aa21.45■■□□□ 1.02
TARDBP-228ENST00000629725 E2F8A0AVK6 867 aa21.44■■□□□ 1.02
TARDBP-228ENST00000629725 TNNC2P02585 160 aa21.44■■□□□ 1.02
TARDBP-228ENST00000629725 WARSP23381 471 aaKnown RBP21.44■■□□□ 1.02
TARDBP-228ENST00000629725 CASP5P51878 434 aa21.44■■□□□ 1.02
TARDBP-228ENST00000629725 MDH1BQ5I0G3 518 aa21.44■■□□□ 1.02
TARDBP-228ENST00000629725 GPD1LQ8N335 351 aa21.44■■□□□ 1.02
TARDBP-228ENST00000629725 NAT16Q8N8M0 369 aa21.44■■□□□ 1.02
TARDBP-228ENST00000629725 OR2I1PQ8NGU4 316 aa21.44■■□□□ 1.02
TARDBP-228ENST00000629725 OTUB2Q96DC9 234 aa21.44■■□□□ 1.02
TARDBP-228ENST00000629725 EPSTI1Q96J88 318 aa21.44■■□□□ 1.02
TARDBP-228ENST00000629725 DNAAF2Q9NVR5 837 aaKnown RBP21.44■■□□□ 1.02
TARDBP-228ENST00000629725 STK17AQ9UEE5 414 aa21.44■■□□□ 1.02
TARDBP-228ENST00000629725 IGSF10Q6WRI0 2623 aa21.44■■□□□ 1.02
TARDBP-228ENST00000629725 GCN1Q92616 2671 aaKnown RBP21.44■■□□□ 1.02
TARDBP-228ENST00000629725 HOXB2P14652 356 aa21.43■■□□□ 1.02
TARDBP-228ENST00000629725 SCAPQ12770 1279 aa21.43■■□□□ 1.02
TARDBP-228ENST00000629725 IFRD2Q12894 506 aaPredicted RBP21.43■■□□□ 1.02
TARDBP-228ENST00000629725 SLC14A1Q13336 389 aa21.43■■□□□ 1.02
TARDBP-228ENST00000629725 SF3A1Q15459 793 aaKnown RBP21.43■■□□□ 1.02
TARDBP-228ENST00000629725 TRIP6Q15654 476 aaKnown RBP21.43■■□□□ 1.02
TARDBP-228ENST00000629725 ETFBKMTQ8IXQ9 262 aa21.43■■□□□ 1.02
TARDBP-228ENST00000629725 OR5B17Q8NGF7 314 aa21.43■■□□□ 1.02
TARDBP-228ENST00000629725 DNAJC19Q96DA6 116 aa21.43■■□□□ 1.02
TARDBP-228ENST00000629725 OLFML3Q9NRN5 406 aa21.43■■□□□ 1.02
TARDBP-228ENST00000629725 DEC1Q9P2X7 70 aa21.43■■□□□ 1.02
TARDBP-228ENST00000629725 CCDC39Q9UFE4 941 aa21.43■■□□□ 1.02
TARDBP-228ENST00000629725 PCDHB9Q9Y5E1 797 aa21.43■■□□□ 1.02
TARDBP-228ENST00000629725 PTPRJQ12913 1337 aa21.43■■□□□ 1.02
TARDBP-228ENST00000629725 IGHV1OR15-9A0A0B4J2B8 117 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 A0A1W2PQD8 194 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 ZBTB24O43167 697 aaPredicted RBP21.42■■□□□ 1.02
TARDBP-228ENST00000629725 ZNF217O75362 1048 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 TULP3O75386 442 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 NTSR1P30989 418 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 GNL1P36915 607 aaPredicted RBP21.42■■□□□ 1.02
TARDBP-228ENST00000629725 ALCAMQ13740 583 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 DUOXA2Q1HG44 320 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 C10orf76Q5T2E6 689 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 C19orf48Q6RUI8 117 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 USP49Q70CQ1 688 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 SV2BQ7L1I2 683 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 SLC41A1Q8IVJ1 513 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 CAMK1GQ96NX5 476 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 SNX25Q9H3E2 840 aa21.42■■□□□ 1.02
TARDBP-228ENST00000629725 HOXC11O43248 304 aaPredicted RBP21.41■■□□□ 1.02
TARDBP-228ENST00000629725 SH3BP5O60239 455 aa21.41■■□□□ 1.02
TARDBP-228ENST00000629725 YWHAQP27348 245 aa21.41■■□□□ 1.02
TARDBP-228ENST00000629725 CACNA2D1P54289 1103 aa21.41■■□□□ 1.02
TARDBP-228ENST00000629725 SURF1Q15526 300 aa21.41■■□□□ 1.02
TARDBP-228ENST00000629725 ANO4Q32M45 955 aa21.41■■□□□ 1.02
TARDBP-228ENST00000629725 TRIML1Q8N9V2 468 aa21.41■■□□□ 1.02
TARDBP-228ENST00000629725 TERB1Q8NA31 727 aa21.41■■□□□ 1.02
TARDBP-228ENST00000629725 ZFRQ96KR1 1074 aaKnown RBP21.41■■□□□ 1.02
TARDBP-228ENST00000629725 HSPA12BQ96MM6 686 aa21.41■■□□□ 1.02
TARDBP-228ENST00000629725 ELOVL4Q9GZR5 314 aa21.41■■□□□ 1.02
TARDBP-228ENST00000629725 SH3BP1Q9Y3L3 701 aa21.41■■□□□ 1.02
TARDBP-228ENST00000629725 PLXNB3Q9ULL4 1909 aa21.41■■□□□ 1.02
TARDBP-228ENST00000629725 A0A1W2PQF6 199 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 ZNF233A6NK53 670 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 KIAA0391O15091 583 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms