RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CCDC6Q16204 474 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 IL17AQ16552 155 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 DBN1Q16643 649 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF852Q6ZMS4 543 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 GK5Q6ZS86 529 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 C4orf32Q8N8J7 132 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 TC2NQ8N9U0 490 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 BSNDQ8WZ55 320 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 DHX58Q96C10 678 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 GSDMAQ96QA5 445 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PLA2G2FQ9BZM2 168 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 MIR1-1HGQ9H1L0 117 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 DLGAP2Q9P1A6 1054 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 FNIP2Q9P278 1114 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PCDHGC4Q9Y5F7 938 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 WDR81Q562E7 1941 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 COL4A3Q01955 1670 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 LAMA1P25391 3075 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 ANHXE9PGG2 379 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 ARHGAP6O43182 974 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 ASMTLO95671 621 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 GDI1P31150 447 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 ARL2P36404 184 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 RPL6Q02878 288 aaKnown RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 SPAG1Q07617 926 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 SRSF5Q13243 272 aaKnown RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 SPECC1LQ69YQ0 1117 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 IQCEQ6IPM2 695 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 RSPO2Q6UXX9 243 aaPredicted RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PDZD4Q76G19 769 aaPredicted RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 MAML2Q8IZL2 1156 aaPredicted RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PDILTQ8N807 584 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 SUMF1Q8NBK3 374 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 IFT74Q96LB3 600 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PGLYRP2Q96PD5 576 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 HSD17B14Q9BPX1 270 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 TMEM60Q9H2L4 133 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PDZD7Q9H5P4 517 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 RBM12Q9NTZ6 932 aaKnown RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 CGNQ9P2M7 1197 aaKnown RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 ANKFY1Q9P2R3 1169 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 PFDN2Q9UHV9 154 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 TIMM13Q9Y5L4 95 aaPredicted RBP5.2□□□□□ -1.58
LINC00550-201ENST00000629293 KNTC1P50748 2209 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 APC2O95996 2303 aa5.2□□□□□ -1.58
LINC00550-201ENST00000629293 SLC38A8A6NNN8 435 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 KHNYNO15037 678 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 N4BP3O15049 544 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 TRAPPC3O43617 180 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 SLU7O95391 586 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 HNRNPA1P09651 372 aaKnown RBP eCLIP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 PXNP49023 591 aaPredicted RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ATXN1P54253 815 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 YARSP54577 528 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ETF1P62495 437 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ROR1Q01973 937 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ADCY1Q08828 1119 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ELAVL2Q12926 359 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ZNF568Q3ZCX4 644 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 CYP4A22Q5TCH4 519 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 SPATA1Q5VX52 437 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ARL6IP4Q66PJ3 421 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 CYP26C1Q6V0L0 522 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 CATSPER3Q86XQ3 398 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 RNF168Q8IYW5 571 aaPredicted RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 TMEM130Q8N3G9 435 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 MCPH1Q8NEM0 835 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 NAP1L4Q99733 375 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 BHMT2Q9H2M3 363 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ZFP14Q9HCL3 533 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 SLC2A4RGQ9NR83 387 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 SAMSN1Q9NSI8 373 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ANKEF1Q9NU02 776 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 RALYQ9UKM9 306 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 MRPS17Q9Y2R5 130 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 MYO18BQ8IUG5 2567 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 NOTCH4Q99466 2003 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 VWA3AA6NCI4 1184 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 K7ERI5 159 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 STX10O60499 249 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 MED24O75448 989 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 CCNE1P24864 410 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 HOXC13P31276 330 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 CCT6AP40227 531 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 KPNA1P52294 538 aaPredicted RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 PEX3P56589 373 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 STARD6P59095 220 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 GOLGA8FQ08AF8 430 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 GOLGA8DPQ0D2H9 430 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ATF7IP2Q5U623 682 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 SYT10Q6XYQ8 523 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 CEP68Q76N32 757 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 FMNL3Q8IVF7 1028 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 YAF2Q8IY57 180 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 ELMOD1Q8N336 334 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 CCDC34Q96HJ3 373 aa5.19□□□□□ -1.58
LINC00550-201ENST00000629293 PYM1Q9BRP8 204 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 TRMT61BQ9BVS5 477 aaKnown RBP5.19□□□□□ -1.58
LINC00550-201ENST00000629293 LMAN1LQ9HAT1 526 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms