RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 CTHRC1Q96CG8 243 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 REPS1Q96D71 796 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 C17orf80Q9BSJ5 609 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 GBA2Q9HCG7 927 aaPredicted RBP3.67□□□□□ -1.82
CNOT1-223ENST00000628857 IL17RBQ9NRM6 502 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 RXFP3Q9NSD7 469 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 FLRT1Q9NZU1 646 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 ST3GAL5Q9UNP4 418 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 SNX14Q9Y5W7 946 aa3.67□□□□□ -1.82
CNOT1-223ENST00000628857 WIPF3A6NGB9 483 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 A8MVJ9 347 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 THAP12O43422 761 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 PMPCBO75439 489 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 PTMAP06454 111 aaKnown RBP3.66□□□□□ -1.82
CNOT1-223ENST00000628857 SLC5A1P13866 664 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 TPH1P17752 444 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 ADORA2AP29274 412 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 GNALP38405 381 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 PTDSS1P48651 473 aaKnown RBP3.66□□□□□ -1.82
CNOT1-223ENST00000628857 GATMP50440 423 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 CASP5P51878 434 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 SUMO2P61956 95 aaKnown RBP3.66□□□□□ -1.82
CNOT1-223ENST00000628857 ZNF543Q08ER8 600 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 SLC10A2Q12908 348 aaPredicted RBP3.66□□□□□ -1.82
CNOT1-223ENST00000628857 IFIT5Q13325 482 aaKnown RBP3.66□□□□□ -1.82
CNOT1-223ENST00000628857 PTCHD3Q3KNS1 767 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 COBLL1Q53SF7 1204 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 ZNF788Q6ZQV5 615 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 NOL8Q76FK4 1167 aaKnown RBP3.66□□□□□ -1.82
CNOT1-223ENST00000628857 RNF44Q7L0R7 432 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 BEND5Q7L4P6 421 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 ATP11CQ8NB49 1132 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 FANCBQ8NB91 859 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 XAGE5Q8WWM1 108 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 R3HDM4Q96D70 268 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 SNX18Q96RF0 628 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 DPCDQ9BVM2 203 aaPredicted RBP3.66□□□□□ -1.82
CNOT1-223ENST00000628857 STK31Q9BXU1 1019 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 ZBTB26Q9HCK0 441 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 STARD7Q9NQZ5 370 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 NKX1-2Q9UD57 310 aaPredicted RBP3.66□□□□□ -1.82
CNOT1-223ENST00000628857 MID2Q9UJV3 735 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 AMFRQ9UKV5 643 aa3.66□□□□□ -1.82
CNOT1-223ENST00000628857 DRG1Q9Y295 367 aaKnown RBP3.66□□□□□ -1.82
CNOT1-223ENST00000628857 COL15A1P39059 1388 aa3.65□□□□□ -1.82
CNOT1-223ENST00000628857 LOC102724159A0A0B4J2E5 919 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 LINC01548A6NM66 108 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 BTBD19C9JJ37 291 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 MASP2O00187 686 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 RGS10O43665 173 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 PQBP1O60828 265 aaKnown RBP3.65□□□□□ -1.83
CNOT1-223ENST00000628857 PIAS2O75928 621 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 RASAL1O95294 804 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 LATS1O95835 1130 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 PARP1P09874 1014 aaKnown RBP3.65□□□□□ -1.83
CNOT1-223ENST00000628857 CTGFP29279 349 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 PIK3CBP42338 1070 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 TM4SF4P48230 202 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 CLCN2P51788 898 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 TFF2Q03403 129 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 PWP2Q15269 919 aaKnown RBP3.65□□□□□ -1.83
CNOT1-223ENST00000628857 CYP1B1Q16678 543 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 LY6KQ17RY6 165 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 PROSER3Q2NL68 480 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 PTCHD4Q6ZW05 846 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 RNF152Q8N8N0 203 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 NGDNQ8NEJ9 315 aaKnown RBP3.65□□□□□ -1.83
CNOT1-223ENST00000628857 DNAJB14Q8TBM8 379 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 IQCDQ96DY2 449 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 DAZAP1Q96EP5 407 aaKnown RBP3.65□□□□□ -1.83
CNOT1-223ENST00000628857 SELENOOQ9BVL4 669 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 TFCP2L1Q9NZI6 479 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 MYO1AQ9UBC5 1043 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 DNAJB11Q9UBS4 358 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 ZNF212Q9UDV6 495 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 VPS51Q9UID3 782 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 HDAC9Q9UKV0 1011 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 PCDHGB6Q9Y5F9 930 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 SNX13Q9Y5W8 968 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 KAT6AQ92794 2004 aa3.65□□□□□ -1.83
CNOT1-223ENST00000628857 A0A1W2PPC4 97 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 PLEKHD1A6NEE1 506 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 POC1B-GALNT4F8VUJ3 575 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 F8W8V4 182 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 H3BNC9 293 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 H7C4K7 107 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 PRC1O43663 620 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 TMPRSS11DO60235 418 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 SNX2O60749 519 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 SRGAP2O75044 1071 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 FGAP02671 866 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 ERBB2P04626 1255 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 KRT18P05783 430 aaKnown RBP3.64□□□□□ -1.83
CNOT1-223ENST00000628857 CHRM5P08912 532 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-223ENST00000628857 ENGP17813 658 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 CERS1P27544 350 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 SLC5A2P31639 672 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 MTHFSP49914 203 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 PGDP52209 483 aa3.64□□□□□ -1.83
CNOT1-223ENST00000628857 COPAP53621 1224 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms