RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 V9GYY5 206 aaPredicted RBP10.45□□□□□ -0.74
SOX2-OT-244ENST00000627738 FNDC1Q4ZHG4 1894 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 CCDC66A2RUB6 948 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 EFCAB8A8MWE9 144 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 CES2O00748 559 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 SYN3O14994 580 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 PAPSS1O43252 624 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 CEP104O60308 925 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 EFCAB14O75071 495 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 BEST1O76090 585 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 OAZ2O95190 189 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 LCP1P13796 627 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 PSMA2P25787 234 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 MAN1A1P33908 653 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 CTNNA1P35221 906 aaKnown RBP10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 RFC1P35251 1148 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 PAFAH1B1P43034 410 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 ACADSBP45954 432 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 RPL34P49207 117 aaKnown RBP10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 PEX5P50542 639 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 MAP3K7CLP57077 242 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 SLC8A3P57103 927 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 RNASE9P60153 205 aaKnown RBP10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 WDR5P61964 334 aaKnown RBP10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 TSPY1Q01534 308 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 SLC6A3Q01959 620 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 ZNF252P-AS1Q0IIN9 211 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 NAA30Q147X3 362 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 CFAP221Q4G0U5 840 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 DCAF12L1Q5VU92 463 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 FAM171A1Q5VUB5 890 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 DAB2IPQ5VWQ8 1189 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 FUT10Q6P4F1 479 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 TMCO2Q7Z6W1 182 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 PIGZQ86VD9 579 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 LRRTM3Q86VH5 581 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 TMEM173Q86WV6 379 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 CEP57Q86XR8 500 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 EMC1Q8N766 993 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 ALG3Q92685 438 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 PIWIL1Q96J94 861 aaKnown RBP10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 PKMYT1Q99640 499 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 GPR62Q9BZJ7 368 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 CWH43Q9H720 699 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 TMLHEQ9NVH6 421 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 RNF14Q9UBS8 474 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 PRKAG2Q9UGJ0 569 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 LCMT1Q9UIC8 334 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 LTBP2Q14767 1821 aa10.44□□□□□ -0.74
SOX2-OT-244ENST00000627738 SF3B1O75533 1304 aaKnown RBP eCLIP10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 F8VP50 259 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 GRAP2O75791 330 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 BAIAP3O94812 1187 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 OR4Q2P0C623 313 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 SSR1P43307 286 aaKnown RBP10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 RABGGTBP53611 331 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 CACNA2D1P54289 1103 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 TAS2R40P59535 323 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 PRR20EP86478 221 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 PRR20CP86479 221 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 PRR20DP86480 221 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 PRR20BP86481 221 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 PRR20AP86496 221 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 C2orf54Q08AI8 447 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 FOXC1Q12948 553 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 ZNF211Q13398 564 aaPredicted RBP10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 PIGHQ14442 188 aaPredicted RBP10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 ERCC6LQ2NKX8 1250 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 TEX35Q5T0J7 233 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 CC2D1AQ6P1N0 951 aaPredicted RBP10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 OLFML1Q6UWY5 402 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 RSRC2Q7L4I2 434 aaKnown RBP10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 OTOP2Q7RTS6 562 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 ZDHHC17Q8IUH5 632 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 RASGEF1CQ8N431 466 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 ZMIZ2Q8NF64 920 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 ADAM32Q8TC27 787 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 ACTRT1Q8TDG2 376 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 FNIP1Q8TF40 1166 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 CLEC4CQ8WTT0 213 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 BCL7CQ8WUZ0 217 aaPredicted RBP10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 UBXN4Q92575 508 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 GOLGA1Q92805 767 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 ZNF689Q96CS4 500 aaPredicted RBP10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 SMARCD1Q96GM5 515 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 B3GALT6Q96L58 329 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 SMOQ99835 787 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 RHOBTB2Q9BYZ6 727 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 ZCWPW1Q9H0M4 648 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 CARD9Q9H257 536 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 TMEM59LQ9UK28 342 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 PCDHA3Q9Y5H8 950 aa10.43□□□□□ -0.74
SOX2-OT-244ENST00000627738 COL4A6Q14031 1691 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 C2CD4BA6NLJ0 364 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 PSTPIP1O43586 416 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 FGBP02675 491 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 TCF4P15884 667 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 GPD1P21695 349 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 FGFR3P22607 806 aa10.42□□□□□ -0.74
SOX2-OT-244ENST00000627738 BDNFP23560 247 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms