RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 LRRC40Q9H9A6 602 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 TTLL13PA6NNM8 815 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 HOXA2O43364 376 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 NUMBP49757 651 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 SLC20A1Q8WUM9 679 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 SCN3BQ9NY72 215 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 DSEQ9UL01 958 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 DCDC2CA8MYV0 355 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 ENDOD1O94919 500 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 LHX1P48742 406 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 RPL10AP62906 217 aaKnown RBP13.24□□□□□ -0.29
SCN8A-209ENST00000627620 NBPF20Q3BBV1 942 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 KBTBD12Q3ZCT8 623 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 FUT11Q495W5 492 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 NBPF12Q5TAG4 269 aaPredicted RBP13.24□□□□□ -0.29
SCN8A-209ENST00000627620 EXOSC4Q9NPD3 245 aaKnown RBP13.24□□□□□ -0.29
SCN8A-209ENST00000627620 SLC25A13Q9UJS0 675 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 CLTCQ00610 1675 aaKnown RBP13.24□□□□□ -0.29
SCN8A-209ENST00000627620 PROSCO94903 275 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 LAMTOR4Q0VGL1 99 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 METTL7BQ6UX53 244 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 P3H2Q8IVL5 708 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 EMC1Q8N766 993 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 KAT2BQ92831 832 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 TMEM121Q9BTD3 319 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 RIOX1Q9H6W3 641 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 OSGEPQ9NPF4 335 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 TRPM5Q9NZQ8 1165 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 LZTS3O60299 673 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-209ENST00000627620 LSM8O95777 96 aaKnown RBP13.23□□□□□ -0.29
SCN8A-209ENST00000627620 TARSP26639 723 aaKnown RBP13.23□□□□□ -0.29
SCN8A-209ENST00000627620 PRIM2P49643 509 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 PMS1P54277 932 aaKnown RBP13.23□□□□□ -0.29
SCN8A-209ENST00000627620 SOX10P56693 466 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 PTPN11Q06124 597 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-209ENST00000627620 ZNF571Q7Z3V5 609 aaPredicted RBP13.23□□□□□ -0.29
SCN8A-209ENST00000627620 SLC12A8A0AV02 714 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 F8W810 466 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 GLRBP48167 497 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 WLSQ5T9L3 541 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 TMEM154Q6P9G4 183 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 DIS3LQ8TF46 1054 aaKnown RBP13.23□□□□□ -0.29
SCN8A-209ENST00000627620 CCDC126Q96EE4 140 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 APOL2Q9BQE5 337 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 CYP3A43Q9HB55 503 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 CXCL8P10145 99 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 HERVK_113P62684 666 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 C9orf131Q5VYM1 1079 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 KDM7AQ6ZMT4 941 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 RXFP2Q8WXD0 754 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 ZNF333Q96JL9 665 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 ZC4H2Q9NQZ6 224 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 ENTPD7Q9NQZ7 604 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 CACNA2D2Q9NY47 1150 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 ZNF286BP0CG31 522 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 IMPDH2P12268 514 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 MLNP12872 115 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 PRLRP16471 622 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 CAPZA2P47755 286 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 PLIN5Q00G26 463 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 BFSP2Q13515 415 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 TRIM60Q495X7 471 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 C11orf63Q6NUN7 778 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 SUGP1Q8IWZ8 645 aaKnown RBP13.23□□□□□ -0.29
SCN8A-209ENST00000627620 PCSK9Q8NBP7 692 aaKnown RBP13.23□□□□□ -0.29
SCN8A-209ENST00000627620 FAR2Q96K12 515 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 OSMRQ99650 979 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 FICDQ9BVA6 458 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 HEY2Q9UBP5 337 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 ATP11BQ9Y2G3 1177 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 LMTK2Q8IWU2 1503 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 CSDE1O75534 798 aaKnown RBP13.23□□□□□ -0.29
SCN8A-209ENST00000627620 DDHD2O94830 711 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 RARGP13631 454 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 SERPINB5P36952 375 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 RUNX1T1Q06455 604 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 MCL1Q07820 350 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 GALNTL6Q49A17 601 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 PLEKHM3Q6ZWE6 761 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 EXD1Q8NHP7 514 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 ACTRT1Q8TDG2 376 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 UCMAQ8WVF2 138 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 ZFP42Q96MM3 310 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 CAPN10Q9HC96 672 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 NMRK1Q9NWW6 199 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 VPS28Q9UK41 221 aa13.23□□□□□ -0.29
SCN8A-209ENST00000627620 ALDH1A2O94788 518 aa13.22□□□□□ -0.29
SCN8A-209ENST00000627620 JCHAINP01591 159 aa13.22□□□□□ -0.29
SCN8A-209ENST00000627620 EPHX2P34913 555 aa13.22□□□□□ -0.29
SCN8A-209ENST00000627620 BST2Q10589 180 aaKnown RBP13.22□□□□□ -0.29
SCN8A-209ENST00000627620 SV2AQ7L0J3 742 aa13.22□□□□□ -0.29
SCN8A-209ENST00000627620 WDR48Q8TAF3 677 aa13.22□□□□□ -0.29
SCN8A-209ENST00000627620 DDI1Q8WTU0 396 aa13.22□□□□□ -0.29
SCN8A-209ENST00000627620 FAM136AQ96C01 138 aa13.22□□□□□ -0.29
SCN8A-209ENST00000627620 GOLGA8TH3BQL2 631 aa13.22□□□□□ -0.29
SCN8A-209ENST00000627620 URODP06132 367 aa13.22□□□□□ -0.29
SCN8A-209ENST00000627620 PGM5Q15124 567 aa13.22□□□□□ -0.29
SCN8A-209ENST00000627620 C11orf74Q86VG3 221 aa13.22□□□□□ -0.29
SCN8A-209ENST00000627620 MYO1HQ8N1T3 1032 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms