RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 DHX9Q08211 1270 aaKnown RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 MYBPC2Q14324 1141 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 TRIP13Q15645 432 aaPredicted RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 MDH1BQ5I0G3 518 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 SMYD4Q8IYR2 804 aaPredicted RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 UBE2E3Q969T4 207 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 NAT9Q9BTE0 207 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 BCO2Q9BYV7 579 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 XAB2Q9HCS7 855 aaKnown RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 HBS1LQ9Y450 684 aaKnown RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 NEXMIFQ5QGS0 1516 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 CLTCQ00610 1675 aaKnown RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 KPNA5O15131 536 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 HSPA9P38646 679 aaKnown RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 FMO5P49326 533 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 SCNN1BP51168 640 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 CDH8P55286 799 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 POU4F1Q01851 419 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 BNC1Q01954 994 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 GPM6BQ13491 265 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 C15orf52Q6ZUT6 534 aaKnown RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 SKAP1Q86WV1 359 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 ABRAQ8N0Z2 381 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 SPPL2BQ8TCT7 592 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 ZCCHC17Q9NP64 241 aaKnown RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 SMPD4Q9NXE4 827 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 CPSF2Q9P2I0 782 aaKnown RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 ERVW-1Q9UQF0 538 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 ATP8A1Q9Y2Q0 1164 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 DISP2A7MBM2 1401 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 FAM187AA6NFU0 413 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 CYP26A1O43174 497 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 LMNAP02545 664 aaKnown RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 MAPTP10636 758 aaKnown RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 MTHFRP42898 656 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 GPS1Q13098 491 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 PGM5Q15124 567 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 GSTA3Q16772 222 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 DENND5BQ6ZUT9 1274 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 TDRD5Q8NAT2 981 aaKnown RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 TMC2Q8TDI7 906 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 CEP19Q96LK0 163 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 BBS4Q96RK4 519 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 CDC23Q9UJX2 597 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 SYCE1LA8MT33 242 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 ACSL4O60488 711 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 IFNA14P01570 189 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 ZNF7P17097 686 aaPredicted RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 PLA2G4AP47712 749 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 CENPAP49450 140 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 MARSP56192 900 aaKnown RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 ERVK-21P61565 698 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 USP10Q14694 798 aaKnown RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 TMEM259Q4ZIN3 620 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 CELF3Q5SZQ8 465 aaKnown RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 SLC24A5Q71RS6 500 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 SLFN11Q7Z7L1 901 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 ZC3H18Q86VM9 953 aaKnown RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 SLC25A41Q8N5S1 370 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 DAGLBQ8NCG7 672 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 TSR3Q9UJK0 312 aaKnown RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 RUVBL2Q9Y230 463 aaKnown RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 PIPSLA2A3N6 862 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 SRP72O76094 671 aaKnown RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 NDUFA10O95299 355 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 SESN2P58004 480 aaPredicted RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 TOMM20Q15388 145 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 ATAD3BQ5T9A4 648 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 GET4Q7L5D6 327 aaPredicted RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 RBM23Q86U06 439 aaKnown RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 HASPINQ8TF76 798 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 AGAP3Q96P47 875 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 TTPALQ9BTX7 342 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 RTFDC1Q9BY42 306 aaPredicted RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 ZFP14Q9HCL3 533 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 VTI1BQ9UEU0 232 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 SEPT3Q9UH03 358 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 ABHD14A-ACY1A0A1B0GW23 586 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 RASSF9O75901 435 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 HOXB8P17481 243 aaPredicted RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 CASP6P55212 293 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 DMWDQ09019 674 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 INSCQ1MX18 579 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 BTN2A2Q8WVV5 523 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 JADE3Q92613 823 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 ELMO2Q96JJ3 720 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 CYTH2Q99418 400 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 IL12RB2Q99665 862 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 C7orf25Q9BPX7 421 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 AGO4Q9HCK5 861 aaKnown RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 MED4Q9NPJ6 270 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 ABCC13Q9NSE7 274 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 CLDND1Q9NY35 253 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 MPP6Q9NZW5 540 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.48□□□□□ -0.57
VPS8-227ENST00000625842 SRRDQ9UH36 339 aa11.48□□□□□ -0.57
VPS8-227ENST00000625842 FTCDO95954 541 aa11.47□□□□□ -0.57
VPS8-227ENST00000625842 SMIM10L2AP0DMW4 78 aa11.47□□□□□ -0.57
VPS8-227ENST00000625842 SMIM10L2BP0DMW5 78 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms