RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 KCNK3O14649 394 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 TRIM66O15016 1216 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 NCK2O43639 380 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 SPOPO43791 374 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 RNF8O76064 485 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 ABLIM3O94929 683 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 KRT7P08729 469 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 CTAGE8P0CG41 777 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 PDGFRAP16234 1089 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 DESP17661 470 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 GPD1P21695 349 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 DNAJB2P25686 324 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 MATKP42679 507 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 MAP3K7CLP57077 242 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 DAOAP59103 153 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 YWHAZP63104 245 aaKnown RBP12.34□□□□□ -0.43
LINC00963-220ENST00000625171 CREMQ03060 361 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 PPP2R5EQ16537 467 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 RTP2Q5QGT7 225 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 TPGS2Q68CL5 300 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 LLGL2Q6P1M3 1020 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 CC2D1AQ6P1N0 951 aaPredicted RBP12.34□□□□□ -0.43
LINC00963-220ENST00000625171 RSRC2Q7L4I2 434 aaKnown RBP12.34□□□□□ -0.43
LINC00963-220ENST00000625171 STRADAQ7RTN6 431 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 CTAGE6Q86UF2 777 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 TMEM173Q86WV6 379 aaPredicted RBP12.34□□□□□ -0.43
LINC00963-220ENST00000625171 CTAGE4Q8IX94 777 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 EXD1Q8NHP7 514 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 JOSD2Q8TAC2 188 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 ATXN2LQ8WWM7 1075 aaKnown RBP12.34□□□□□ -0.43
LINC00963-220ENST00000625171 ALG3Q92685 438 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 PGAP3Q96FM1 320 aaPredicted RBP12.34□□□□□ -0.43
LINC00963-220ENST00000625171 TMEM169Q96HH4 297 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 SPATA17Q96L03 361 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 SLC2A13Q96QE2 648 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 TMEM209Q96SK2 561 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 YME1L1Q96TA2 773 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 TBCBQ99426 244 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 GOLPH3Q9H4A6 298 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00963-220ENST00000625171 TMEM30AQ9NV96 361 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 DDX56Q9NY93 547 aaKnown RBP12.34□□□□□ -0.43
LINC00963-220ENST00000625171 RWDD3Q9Y3V2 267 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 PCDHB12Q9Y5F1 795 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 IRAK3Q9Y616 596 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 MRPL42Q9Y6G3 142 aaKnown RBP12.34□□□□□ -0.43
LINC00963-220ENST00000625171 SLC4A7Q9Y6M7 1214 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 NCOR1O75376 2440 aa12.34□□□□□ -0.43
LINC00963-220ENST00000625171 COL4A4P53420 1690 aaPredicted RBP12.33□□□□□ -0.44
LINC00963-220ENST00000625171 ZNF487B1APH4 448 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 NT5C1B-RDH14C9J2C7 533 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 F8VP50 259 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 FSCN2O14926 492 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 LILRB3O75022 631 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 SRGAP2O75044 1071 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 LRCH4O75427 683 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 TADA3O75528 432 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 ZBED1O96006 694 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 TUBBP07437 444 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 BDNFP23560 247 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 NOS2P35228 1153 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 PTPN7P35236 360 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 RGS7P49802 495 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 TKTL1P51854 596 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 EPHB4P54760 987 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 KRT17Q04695 432 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 GRIN2CQ14957 1233 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 HADHQ16836 314 aaKnown RBP12.33□□□□□ -0.44
LINC00963-220ENST00000625171 CCDC14Q49A88 953 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 SLC39A12Q504Y0 691 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 BOLA3Q53S33 107 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 TAS1R1Q7RTX1 841 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 PSTKQ8IV42 348 aaKnown RBP12.33□□□□□ -0.44
LINC00963-220ENST00000625171 HERC6Q8IVU3 1022 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 RCOR2Q8IZ40 523 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 MMGT1Q8N4V1 131 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 FIBCD1Q8N539 461 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 ZNF276Q8N554 614 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 ARFGAP1Q8N6T3 406 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 FBXO22Q8NEZ5 403 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 CMASQ8NFW8 434 aaPredicted RBP12.33□□□□□ -0.44
LINC00963-220ENST00000625171 TEKT4Q8WW24 435 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 MAIP1Q8WWC4 291 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 RXFP2Q8WXD0 754 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 BTBD6Q96KE9 485 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 KCNK16Q96T55 309 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 CARD6Q9BX69 1037 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 VN1R3Q9BXE9 311 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 POPDC2Q9HBU9 364 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 RXFP1Q9HBX9 757 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 METTL5Q9NRN9 209 aaKnown RBP12.33□□□□□ -0.44
LINC00963-220ENST00000625171 HCSTQ9UBK5 93 aa12.33□□□□□ -0.44
LINC00963-220ENST00000625171 PACSIN2Q9UNF0 486 aaPredicted RBP12.33□□□□□ -0.44
LINC00963-220ENST00000625171 C5orf67F2Z3F1 127 aa12.32□□□□□ -0.44
LINC00963-220ENST00000625171 GOLGA8SH3BPF8 625 aa12.32□□□□□ -0.44
LINC00963-220ENST00000625171 CCDC188H7C350 402 aa12.32□□□□□ -0.44
LINC00963-220ENST00000625171 PGRMC1O00264 195 aaKnown RBP12.32□□□□□ -0.44
LINC00963-220ENST00000625171 PDE2AO00408 941 aaPredicted RBP12.32□□□□□ -0.44
LINC00963-220ENST00000625171 ZNF185O15231 689 aa12.32□□□□□ -0.44
LINC00963-220ENST00000625171 DAB1O75553 588 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms