RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y TRPC3Q13507 836 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y SNRNP35Q16560 246 aaKnown RBP17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y HSF5Q4G112 596 aaPredicted RBP17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y LY6G5CQ5SRR4 150 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y BTBD8Q5XKL5 378 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y SYT12Q8IV01 421 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y ABCA7Q8IZY2 2146 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y NUP93Q8N1F7 819 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y DEFB119Q8N690 84 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y KIAA1958Q8N8K9 716 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y B3GNT5Q9BYG0 378 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y SLC32A1Q9H598 525 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y TMEM30AQ9NV96 361 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y CHORDC1Q9UHD1 332 aaPredicted RBP17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y EVLQ9UI08 416 aaPredicted RBP17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y MBD1Q9UIS9 605 aaPredicted RBP17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y SH3BP1Q9Y3L3 701 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y THADAQ6YHU6 1953 aa17.22■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y CHD6Q8TD26 2715 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y CLIC2O15247 247 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y ADAM23O75077 832 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y ENGP17813 658 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y SYT1P21579 422 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y HOXD13P35453 343 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y KIR2DL1P43626 348 aaPredicted RBP17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y ATXN3P54252 364 aaPredicted RBP17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y GAD2Q05329 585 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y SLC39A14Q15043 492 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y MAP7D1Q3KQU3 841 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y LYSMD4Q5XG99 296 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y KDF1Q8NAX2 398 aaPredicted RBP17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y FBXO32Q969P5 355 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y INTS4Q96HW7 963 aaKnown RBP17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y USP28Q96RU2 1077 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y CGRRF1Q99675 332 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y MED10Q9BTT4 135 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y GTPBP2Q9BX10 602 aaKnown RBP17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y LRRC27Q9C0I9 530 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y NACA2Q9H009 215 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y WASF3Q9UPY6 502 aa17.21■□□□□ 0.35
CD99-211ENST00000623253_PAR_Y FRYQ5TBA9 3013 aa17.21■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y CEP295Q9C0D2 2601 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y HELZP42694 1942 aaKnown RBP17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y A0A0A0MRY4 1105 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y E2F8A0AVK6 867 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y COCHO43405 550 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y PHACTR2O75167 634 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y RTN3O95197 1032 aaPredicted RBP17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y MYL6P60660 151 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y ASIC1P78348 528 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y ANO4Q32M45 955 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y HECTD3Q5T447 861 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y NELFCDQ8IXH7 590 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y B3GALNT2Q8NCR0 500 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y PDZD8Q8NEN9 1154 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y KCNK16Q96T55 309 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y BACH2Q9BYV9 841 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y FSCN3Q9NQT6 498 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y AGPAT3Q9NRZ7 376 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y DEC1Q9P2X7 70 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y NUP205Q92621 2012 aa17.2■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y SPAARA0A1B0GVQ0 90 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y FAM163BP0C2L3 166 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y IRF1P10914 325 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y ITPKAP23677 461 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y WASP42768 502 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y RPL6Q02878 288 aaKnown RBP17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y CYP24A1Q07973 514 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y PSMD6Q15008 389 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y STK38Q15208 465 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y C10orf76Q5T2E6 689 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y NUDT18Q6ZVK8 323 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y ZNF513Q8N8E2 541 aaPredicted RBP17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y SCAMP5Q8TAC9 235 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y TNMDQ9H2S6 317 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y CCSER2Q9H7U1 834 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y ATP8B3O60423 1300 aa17.19■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y EIF3DO15371 548 aaKnown RBP eCLIP17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y ZBTB24O43167 697 aaPredicted RBP17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y TGFB1I1O43294 461 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y AP5Z1O43299 807 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y HYAL3O43820 417 aaPredicted RBP17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y TULP3O75386 442 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y CHRM1P11229 460 aaPredicted RBP17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y DPP6P42658 865 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y CDH8P55286 799 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y SIM1P81133 766 aaPredicted RBP17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y AMPD3Q01432 767 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y GFPT1Q06210 699 aaPredicted RBP17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y PREPLQ4J6C6 727 aaPredicted RBP17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y SPDYCQ5MJ68 293 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y FAM26FQ5R3K3 315 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y SLC23A3Q6PIS1 610 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y TRMT11Q7Z4G4 463 aaKnown RBP17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y BBS7Q8IWZ6 715 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y HDDC3Q8N4P3 179 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y XXYLT1Q8NBI6 393 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y ZNF507Q8TCN5 953 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y ZNF516Q92618 1163 aa17.18■□□□□ 0.34
CD99-211ENST00000623253_PAR_Y DHX58Q96C10 678 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms