RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 CCDC40Q4G0X9 1142 aa13.82□□□□□ -0.2
ATRX-208ENST00000622960 PREPLQ4J6C6 727 aaPredicted RBP13.82□□□□□ -0.2
ATRX-208ENST00000622960 CEP68Q76N32 757 aa13.82□□□□□ -0.2
ATRX-208ENST00000622960 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.82□□□□□ -0.2
ATRX-208ENST00000622960 LONP2Q86WA8 852 aa13.82□□□□□ -0.2
ATRX-208ENST00000622960 ENGASEQ8NFI3 743 aa13.82□□□□□ -0.2
ATRX-208ENST00000622960 NELL1Q92832 810 aa13.82□□□□□ -0.2
ATRX-208ENST00000622960 OTUB2Q96DC9 234 aa13.82□□□□□ -0.2
ATRX-208ENST00000622960 EEF2KMTQ96G04 330 aa13.82□□□□□ -0.2
ATRX-208ENST00000622960 PNPLA8Q9NP80 782 aa13.82□□□□□ -0.2
ATRX-208ENST00000622960 HMGXB4Q9UGU5 601 aa13.82□□□□□ -0.2
ATRX-208ENST00000622960 MYO16Q9Y6X6 1858 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 E2F8A0AVK6 867 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.81□□□□□ -0.2
ATRX-208ENST00000622960 RNF40O75150 1001 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 CILPO75339 1184 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 OLFM2O95897 454 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 EGFP01133 1207 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 GALK1P51570 392 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 SIM2Q14190 667 aaPredicted RBP13.81□□□□□ -0.2
ATRX-208ENST00000622960 GAS6Q14393 721 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 BTBD8Q5XKL5 378 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 HEATR6Q6AI08 1181 aaKnown RBP13.81□□□□□ -0.2
ATRX-208ENST00000622960 LAIR1Q6GTX8 287 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 FSTL4Q6MZW2 842 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 NUDT18Q6ZVK8 323 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 FILIP1Q7Z7B0 1213 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 ELOA2Q8IYF1 753 aaPredicted RBP13.81□□□□□ -0.2
ATRX-208ENST00000622960 KIAA2013Q8IYS2 634 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 C12orf29Q8N999 325 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 SUMF1Q8NBK3 374 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 SCAMP5Q8TAC9 235 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 RIN3Q8TB24 985 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 DHTKD1Q96HY7 919 aaPredicted RBP13.81□□□□□ -0.2
ATRX-208ENST00000622960 HEXIM2Q96MH2 286 aaKnown RBP13.81□□□□□ -0.2
ATRX-208ENST00000622960 CDK5RAP1Q96SZ6 601 aaKnown RBP13.81□□□□□ -0.2
ATRX-208ENST00000622960 HNRNPABQ99729 332 aaKnown RBP13.81□□□□□ -0.2
ATRX-208ENST00000622960 SMOQ99835 787 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 CSNK1G1Q9HCP0 422 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 TMEM30AQ9NV96 361 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 GMIPQ9P107 970 aa13.81□□□□□ -0.2
ATRX-208ENST00000622960 CHORDC1Q9UHD1 332 aaPredicted RBP13.81□□□□□ -0.2
ATRX-208ENST00000622960 LSM7Q9UK45 103 aaKnown RBP13.81□□□□□ -0.2
ATRX-208ENST00000622960 F5P12259 2224 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 CACNA1IQ9P0X4 2223 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 MYH10P35580 1976 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 OTOL1A6NHN0 477 aaPredicted RBP13.8□□□□□ -0.2
ATRX-208ENST00000622960 CHURC1-FNTBB4DL54 471 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 TNFRSF10BO14763 440 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 COCHO43405 550 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 TLR5O60602 858 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 TDGF1P13385 188 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 ACO1P21399 889 aaKnown RBP13.8□□□□□ -0.2
ATRX-208ENST00000622960 TBXAS1P24557 533 aaPredicted RBP13.8□□□□□ -0.2
ATRX-208ENST00000622960 ID4P47928 161 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 FNTBP49356 437 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 PSEN1P49768 467 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 ZNF394Q53GI3 561 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 SNX30Q5VWJ9 437 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 ANKRD40Q6AI12 368 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 KLHL10Q6JEL2 608 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 CLEC20AQ6ZU45 233 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 PAQR9Q6ZVX9 377 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 RPLP0P6Q8NHW5 317 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 SPATA20Q8TB22 786 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 ERCC4Q92889 916 aaPredicted RBP13.8□□□□□ -0.2
ATRX-208ENST00000622960 CHFRQ96EP1 664 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 CEP63Q96MT8 703 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 RNF38Q9H0F5 515 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 APOBEC3GQ9HC16 384 aaKnown RBP13.8□□□□□ -0.2
ATRX-208ENST00000622960 CISHQ9NSE2 258 aa13.8□□□□□ -0.2
ATRX-208ENST00000622960 FAM92AA1XBS5 289 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 FGFR1OPO95684 399 aaKnown RBP13.79□□□□□ -0.2
ATRX-208ENST00000622960 APODP05090 189 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 CYP17A1P05093 508 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 CCDC192P0DO97 292 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 IRF1P10914 325 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 RALAP11233 206 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 ADH5P11766 374 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 SDHBP21912 280 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 HOXA6P31267 233 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 ATP5C1P36542 298 aaKnown RBP13.79□□□□□ -0.2
ATRX-208ENST00000622960 EIF2DP41214 584 aaKnown RBP13.79□□□□□ -0.2
ATRX-208ENST00000622960 ISM2Q6H9L7 571 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 WDR5BQ86VZ2 330 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 ARHGAP18Q8N392 663 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 CAMKK1Q8N5S9 505 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 TMEM176AQ96HP8 235 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 TWNKQ96RR1 684 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 LINC00597Q9H2U6 94 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 CCSER2Q9H7U1 834 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 IL37Q9NZH6 218 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 HESX1Q9UBX0 185 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 USP18Q9UMW8 372 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 SCML2Q9UQR0 700 aa13.79□□□□□ -0.2
ATRX-208ENST00000622960 CCDC163A0A0D9SF12 145 aa13.78□□□□□ -0.2
ATRX-208ENST00000622960 TRIM49BA6NDI0 452 aa13.78□□□□□ -0.2
ATRX-208ENST00000622960 K7ESF4 209 aa13.78□□□□□ -0.2
ATRX-208ENST00000622960 BEST1O76090 585 aa13.78□□□□□ -0.2
ATRX-208ENST00000622960 GAD2Q05329 585 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms