RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 ARHGEF4Q9NR80 690 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 TMEM74BQ9NUR3 256 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 BCCIPQ9P287 314 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC00963-214ENST00000622680 DOCK9Q9BZ29 2069 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 SHROOM3Q8TF72 1996 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 TCRBV21S2A2A0A5A6 115 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 CLIC2O15247 247 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 APODP05090 189 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 ADH5P11766 374 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 PFKLP17858 780 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 KIR2DL1P43626 348 aaPredicted RBP11.66□□□□□ -0.54
LINC00963-214ENST00000622680 CYP2J2P51589 502 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 MRPS21P82921 87 aaKnown RBP11.66□□□□□ -0.54
LINC00963-214ENST00000622680 SNRNP35Q16560 246 aaKnown RBP11.66□□□□□ -0.54
LINC00963-214ENST00000622680 DUOXA2Q1HG44 320 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 LY6G5CQ5SRR4 150 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 CCDC65Q8IXS2 484 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 ADGRG2Q8IZP9 1017 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 PHTF2Q8N3S3 785 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 NAT16Q8N8M0 369 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 OR6B3Q8NGW1 331 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 CCDC26Q8TAB7 109 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 WHAMMQ8TF30 809 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 WBP2Q969T9 261 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 ELMO3Q96BJ8 720 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 ZFRQ96KR1 1074 aaKnown RBP11.66□□□□□ -0.54
LINC00963-214ENST00000622680 SPACA7Q96KW9 195 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 C8orf48Q96LL4 319 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 CGRRF1Q99675 332 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 SCNM1Q9BWG6 230 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 B3GNT5Q9BYG0 378 aa11.66□□□□□ -0.54
LINC00963-214ENST00000622680 GCN1Q92616 2671 aaKnown RBP11.66□□□□□ -0.54
LINC00963-214ENST00000622680 SLC9A3R1O14745 358 aaPredicted RBP11.65□□□□□ -0.54
LINC00963-214ENST00000622680 KIAA0391O15091 583 aaKnown RBP11.65□□□□□ -0.54
LINC00963-214ENST00000622680 MAP3K13O43283 966 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 COCHO43405 550 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 ALDH1A2O94788 518 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 ADH1CP00326 375 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 CST3P01034 146 aaPredicted RBP11.65□□□□□ -0.54
LINC00963-214ENST00000622680 IRF1P10914 325 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 CEACAM1P13688 526 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 PTPN1P18031 435 aaKnown RBP11.65□□□□□ -0.54
LINC00963-214ENST00000622680 TNNI1P19237 187 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 CSRP1P21291 193 aaKnown RBP11.65□□□□□ -0.54
LINC00963-214ENST00000622680 SYT1P21579 422 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 GNL1P36915 607 aaPredicted RBP11.65□□□□□ -0.54
LINC00963-214ENST00000622680 TNNC1P63316 161 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 CYP24A1Q07973 514 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 CUL4AQ13619 759 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 SURF1Q15526 300 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 MAP7D1Q3KQU3 841 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 WDR72Q3MJ13 1102 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 TDRD10Q5VZ19 366 aaKnown RBP11.65□□□□□ -0.54
LINC00963-214ENST00000622680 SCARA5Q6ZMJ2 495 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 LPCAT2Q7L5N7 544 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 NELFCDQ8IXH7 590 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 PGBD3Q8N328 593 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 DEFB119Q8N690 84 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 B3GALNT2Q8NCR0 500 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 FBXO32Q969P5 355 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 CCDC127Q96BQ5 260 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 CEP295NLQ96MC4 621 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 SLITRK1Q96PX8 696 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 ELOVL4Q9GZR5 314 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 GZF1Q9H116 711 aaPredicted RBP11.65□□□□□ -0.54
LINC00963-214ENST00000622680 SMYD3Q9H7B4 428 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 CCSER2Q9H7U1 834 aa11.65□□□□□ -0.54
LINC00963-214ENST00000622680 POLMQ9NP87 494 aaPredicted RBP11.65□□□□□ -0.54
LINC00963-214ENST00000622680 EVLQ9UI08 416 aaPredicted RBP11.65□□□□□ -0.54
LINC00963-214ENST00000622680 A8MXQ7 604 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 TNFRSF10BO14763 440 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 TRIM24O15164 1050 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 TGFB1I1O43294 461 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 HYAL3O43820 417 aaPredicted RBP11.64□□□□□ -0.55
LINC00963-214ENST00000622680 TACC1O75410 805 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 CLSTN1O94985 981 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 CFIP05156 583 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 HOXB3P14651 431 aaPredicted RBP11.64□□□□□ -0.55
LINC00963-214ENST00000622680 ENGP17813 658 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 PDCP20941 246 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 ITPKAP23677 461 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 CASP1P29466 404 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 EIF2DP41214 584 aaKnown RBP11.64□□□□□ -0.55
LINC00963-214ENST00000622680 GRIA2P42262 883 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 WASP42768 502 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 MYL6P60660 151 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 ASIC1P78348 528 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 SLC39A14Q15043 492 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 E2F4Q16254 413 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 EOGTQ5NDL2 527 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 LYSMD4Q5XG99 296 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 STXBP4Q6ZWJ1 553 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 EPM2AIP1Q7L775 607 aaPredicted RBP11.64□□□□□ -0.55
LINC00963-214ENST00000622680 FAM35AQ86V20 835 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 SYT12Q8IV01 421 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 BBS7Q8IWZ6 715 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 OR2I1PQ8NGU4 316 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 SCAMP5Q8TAC9 235 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 ZNF516Q92618 1163 aa11.64□□□□□ -0.55
LINC00963-214ENST00000622680 GATA6Q92908 595 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms