RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 CCDC63Q8NA47 563 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.5□□□□□ -0.41
TP53-227ENST00000622645 EMID1Q96A84 441 aaPredicted RBP12.5□□□□□ -0.41
TP53-227ENST00000622645 C18orf25Q96B23 403 aaPredicted RBP12.5□□□□□ -0.41
TP53-227ENST00000622645 KLF6Q99612 283 aaPredicted RBP12.5□□□□□ -0.41
TP53-227ENST00000622645 EIF2AQ9BY44 585 aaKnown RBP12.5□□□□□ -0.41
TP53-227ENST00000622645 MIS12Q9H081 205 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 CDHR5Q9HBB8 845 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 KIAA1257Q9ULG3 409 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 HEY1Q9Y5J3 304 aa12.5□□□□□ -0.41
TP53-227ENST00000622645 COL1A2P08123 1366 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 GOLGA8RI6L899 631 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 GABBR2O75899 941 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 YBX3P16989 372 aaKnown RBP eCLIP12.49□□□□□ -0.41
TP53-227ENST00000622645 PHBP35232 272 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 RDXP35241 583 aaKnown RBP12.49□□□□□ -0.41
TP53-227ENST00000622645 GCLCP48506 637 aaPredicted RBP12.49□□□□□ -0.41
TP53-227ENST00000622645 CA9Q16790 459 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 DPY19L2Q6NUT2 758 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 OLFML1Q6UWY5 402 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 DPP9Q86TI2 863 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 ECHDC2Q86YB7 292 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 ZC3H15Q8WU90 426 aaKnown RBP12.49□□□□□ -0.41
TP53-227ENST00000622645 FAM172AQ8WUF8 416 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 KHSRPQ92945 711 aaKnown RBP eCLIP12.49□□□□□ -0.41
TP53-227ENST00000622645 RNF157Q96PX1 679 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 C12orf65Q9H3J6 166 aaKnown RBP12.49□□□□□ -0.41
TP53-227ENST00000622645 ACSS3Q9H6R3 686 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 SENP1Q9P0U3 644 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 KLHL14Q9P2G3 628 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 SMG5Q9UPR3 1016 aaKnown RBP12.49□□□□□ -0.41
TP53-227ENST00000622645 BTBD19C9JJ37 291 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 ADCY6O43306 1168 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 STAU1O95793 577 aaKnown RBP12.49□□□□□ -0.41
TP53-227ENST00000622645 MMP3P08254 477 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 FGFR1P11362 822 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 TFE3P19532 575 aaPredicted RBP12.49□□□□□ -0.41
TP53-227ENST00000622645 STIP1P31948 543 aaKnown RBP12.49□□□□□ -0.41
TP53-227ENST00000622645 ELK3P41970 407 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 ELF3P78545 371 aaPredicted RBP12.49□□□□□ -0.41
TP53-227ENST00000622645 FAM228AQ86W67 206 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 PLD5Q8N7P1 536 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 C7orf31Q8N865 590 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 PHTF1Q9UMS5 762 aa12.49□□□□□ -0.41
TP53-227ENST00000622645 PAPSS1O43252 624 aaPredicted RBP12.48□□□□□ -0.41
TP53-227ENST00000622645 YARSP54577 528 aaKnown RBP12.48□□□□□ -0.41
TP53-227ENST00000622645 NCALDP61601 193 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 KCNJ2P63252 427 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 RNASELQ05823 741 aaKnown RBP12.48□□□□□ -0.41
TP53-227ENST00000622645 BNIP1Q12981 228 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 TFDP2Q14188 446 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 RASA2Q15283 850 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 PKDCCQ504Y2 493 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 FAXCQ5TGI0 409 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 ADGRD1Q6QNK2 874 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 PQLC3Q8N755 202 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 ANKLE1Q8NAG6 615 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 OR6B3Q8NGW1 331 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 SLC35F5Q8WV83 523 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 MAGEB5Q9BZ81 275 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 DPEP3Q9H4B8 488 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 ECT2Q9H8V3 914 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 USP29Q9HBJ7 922 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 GJD2Q9UKL4 321 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 KCNN4O15554 427 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 SDC4P31431 198 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 SCN1AP35498 2009 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 MSH2P43246 934 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 SLC18A1P54219 525 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 SLC6A3Q01959 620 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 SNCBQ16143 134 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 PDK4Q16654 411 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 DUSP28Q4G0W2 176 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 PPP6R3Q5H9R7 873 aaPredicted RBP12.48□□□□□ -0.41
TP53-227ENST00000622645 LVRNQ6Q4G3 990 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 CATSPER4Q7RTX7 472 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 PNMA8AQ86V59 439 aaPredicted RBP12.48□□□□□ -0.41
TP53-227ENST00000622645 NT5DC4Q86YG4 428 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 OR6J1Q8NGC5 347 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 PCDH19Q8TAB3 1148 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 CLEC4CQ8WTT0 213 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 DCAKDQ8WVC6 231 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 FAF2Q96CS3 445 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 MS4A4AQ96JQ5 239 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 OSMRQ99650 979 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 DHRS4Q9BTZ2 278 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 APOL6Q9BWW8 343 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 PHACTR1Q9C0D0 580 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 PPCSQ9HAB8 311 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 RXFP1Q9HBX9 757 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 RAB6BQ9NRW1 208 aa12.48□□□□□ -0.41
TP53-227ENST00000622645 WDR91A4D1P6 747 aa12.47□□□□□ -0.41
TP53-227ENST00000622645 MGRN1O60291 552 aa12.47□□□□□ -0.41
TP53-227ENST00000622645 AKAP5P24588 427 aa12.47□□□□□ -0.41
TP53-227ENST00000622645 RBL1P28749 1068 aa12.47□□□□□ -0.41
TP53-227ENST00000622645 ATXN1P54253 815 aaKnown RBP12.47□□□□□ -0.41
TP53-227ENST00000622645 BOLA3Q53S33 107 aa12.47□□□□□ -0.41
TP53-227ENST00000622645 FAM47CQ5HY64 1035 aa12.47□□□□□ -0.41
TP53-227ENST00000622645 SWT1Q5T5J6 900 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms