RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 PANX3Q96QZ0 392 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 ETNK2Q9NVF9 386 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 PIH1D1Q9NWS0 290 aaKnown RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 SENP1Q9P0U3 644 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 SLC7A8Q9UHI5 535 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 TELO2Q9Y4R8 837 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 ARFGEF1Q9Y6D6 1849 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 NAV1Q8NEY1 1877 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 UGT1A9O60656 530 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 WEE2P0C1S8 567 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 NCF2P19878 526 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 MX2P20592 715 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 GPC3P51654 580 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 BACE1P56817 501 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 BST1Q10588 318 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 TAF5Q15542 800 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 NFIL3Q16649 462 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 PPP6R3Q5H9R7 873 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 ZBTB41Q5SVQ8 909 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 POLNQ7Z5Q5 900 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 PCGF5Q86SE9 256 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 PIP4K2CQ8TBX8 421 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 CPT1BQ92523 772 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 PPWD1Q96BP3 646 aaKnown RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 RBM41Q96IZ5 413 aaKnown RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 UGT1A7Q9HAW7 530 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 UGT1A10Q9HAW8 530 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 UGT1A8Q9HAW9 530 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 CYLDQ9NQC7 956 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 COL20A1Q9P218 1284 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 TJP2Q9UDY2 1190 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 MTO1Q9Y2Z2 717 aaKnown RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 AK5Q9Y6K8 562 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 PLIN4Q96Q06 1357 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 RREB1Q92766 1687 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 KBTBD13C9JR72 458 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 TRAFD1O14545 582 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 GPC4O75487 556 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 TMEM63AO94886 807 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 CELF2O95319 508 aaKnown RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 GSTA2P09210 222 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 RARBP10826 455 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 GTF2H1P32780 548 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 RPL22P35268 128 aaKnown RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 ZNF157P51786 506 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 VCPP55072 806 aaKnown RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 OGDHQ02218 1023 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 CYP24A1Q07973 514 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 MORF4L2Q15014 288 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 TAF12Q16514 161 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 SATL1Q86VE3 508 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 ERO1BQ86YB8 467 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 ULK2Q8IYT8 1036 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 BANPQ8N9N5 519 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 DNAAF3Q8N9W5 541 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 KCTD6Q8NC69 237 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 TMEM161BQ8NDZ6 487 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 ABTB1Q969K4 478 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 FAM81BQ96LP2 452 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 PHF12Q96QT6 1004 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 SRPK1Q96SB4 655 aaKnown RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 MXRA8Q9BRK3 442 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 ADPGKQ9BRR6 497 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 GPBP1L1Q9HC44 474 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 LNPEPQ9UIQ6 1025 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 MYOCOSA0A1B0GUC4 107 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 ANKRD33BA6NCL7 494 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 SPECC1L-ADORA2AF8WAN1 911 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 K7ERI5 159 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 ABHD2P08910 425 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 C6orf222P0C671 652 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-216ENST00000620854 P4HA1P13674 534 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 NLRP11P59045 1033 aaKnown RBP7.23□□□□□ -1.25
NEDD9-216ENST00000620854 YWHAEP62258 255 aaKnown RBP7.23□□□□□ -1.25
NEDD9-216ENST00000620854 AP2B1P63010 937 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 GTF2BQ00403 316 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 MAP7Q14244 749 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 DBN1Q16643 649 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 MMEL1Q495T6 779 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 RABGAP1LQ5R372 815 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 OR6B2Q6IFH4 312 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 C16orf46Q6P387 395 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 SLC39A4Q6P5W5 647 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 NPNTQ6UXI9 565 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 DENND5BQ6ZUT9 1274 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 MON1BQ7L1V2 547 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 NUDCD3Q8IVD9 361 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 MAP7D3Q8IWC1 876 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 KATNAL2Q8IYT4 538 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 RCOR2Q8IZ40 523 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 ECSITQ9BQ95 431 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 STRA6Q9BX79 667 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 ACSS2Q9NR19 701 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 GPRC5DQ9NZD1 345 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 ANGPTL2Q9UKU9 493 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 COL22A1Q8NFW1 1626 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-216ENST00000620854 CCL15-CCL14A0A0B4J2E2 113 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 TCRBV9S1A1TA0A576 114 aa7.23□□□□□ -1.25
NEDD9-216ENST00000620854 HNRNPRO43390 633 aaKnown RBP7.23□□□□□ -1.25
NEDD9-216ENST00000620854 PSTPIP1O43586 416 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms