RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 PIK3R2O00459 728 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 FBXO21O94952 628 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 SEC24AO95486 1093 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 ADH1AP07327 375 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 KRT3P12035 628 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 LCP1P13796 627 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 KLRC2P26717 231 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 ELF1P32519 619 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 IRS1P35568 1242 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 SCNN1AP37088 669 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 TKTL1P51854 596 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 HADHBP55084 474 aaKnown RBP8.44□□□□□ -1.06
CPNE3-209ENST00000620393 NAP1L1P55209 391 aaKnown RBP8.44□□□□□ -1.06
CPNE3-209ENST00000620393 SLC6A3Q01959 620 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 IFI16Q16666 785 aaKnown RBP8.44□□□□□ -1.06
CPNE3-209ENST00000620393 DDR2Q16832 855 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 LRIT3Q3SXY7 679 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 MGAT5BQ3V5L5 792 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 CYP4A22Q5TCH4 519 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 PLPP4Q5VZY2 271 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 PM20D1Q6GTS8 502 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 LLGL2Q6P1M3 1020 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 NUP93Q8N1F7 819 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 SCML4Q8N228 414 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 C3orf20Q8ND61 904 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 ARNTL2Q8WYA1 636 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 SELENOOQ9BVL4 669 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 NUP85Q9BW27 656 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 CERS4Q9HA82 394 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 CYP4F11Q9HBI6 524 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 CNGB3Q9NQW8 809 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 COMMD8Q9NX08 183 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 CTTNBP2NLQ9P2B4 639 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 COG5Q9UP83 839 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 SCINQ9Y6U3 715 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 NCANO14594 1321 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 MACROD2A1Z1Q3 448 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 GOLGA8SH3BPF8 625 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 MYO1FO00160 1098 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 TGM5O43548 720 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 BUB1O43683 1085 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 KIF5CO60282 957 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 ZNF500O60304 480 aaPredicted RBP8.43□□□□□ -1.06
CPNE3-209ENST00000620393 MOCS3O95396 460 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 ZBED1O96006 694 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 TUBB4AP04350 444 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 GLI1P08151 1106 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 CA8P35219 290 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 ALDH1A3P47895 512 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 GPR15P49685 360 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 MRPS5P82675 430 aaKnown RBP8.43□□□□□ -1.06
CPNE3-209ENST00000620393 ADIGQ0VDE8 80 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 EFHC1Q5JVL4 640 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 SDHAF4Q5VUM1 108 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 DNAJC24Q6P3W2 148 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 DCUN1D2Q6PH85 259 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 OLFML1Q6UWY5 402 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 NYAP1Q6ZVC0 841 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 FAM183BPQ6ZVS7 135 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 RTL10Q7L3V2 364 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 ARCQ7LC44 396 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 GPRIN1Q7Z2K8 1008 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 SIX6OS1Q8N1H7 587 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 TTC9BQ8N6N2 239 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 TPCN2Q8NHX9 752 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 SCAMP5Q8TAC9 235 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 ZNF564Q8TBZ8 553 aaPredicted RBP8.43□□□□□ -1.06
CPNE3-209ENST00000620393 UBE2Q2Q8WVN8 375 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 IRGQQ8WZA9 623 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 NDRG1Q92597 394 aaKnown RBP8.43□□□□□ -1.06
CPNE3-209ENST00000620393 ZDHHC16Q969W1 377 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 SEPT5Q99719 369 aaPredicted RBP8.43□□□□□ -1.06
CPNE3-209ENST00000620393 IRX2Q9BZI1 471 aaPredicted RBP8.43□□□□□ -1.06
CPNE3-209ENST00000620393 ULBP1Q9BZM6 244 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 FBXO44Q9H4M3 255 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 OSGEPQ9NPF4 335 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 ASNSD1Q9NWL6 643 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 TMEM59LQ9UK28 342 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 PCDHGC5Q9Y5F6 944 aa8.43□□□□□ -1.06
CPNE3-209ENST00000620393 FAM92AA1XBS5 289 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 GRID2IPA4D2P6 1211 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 EPOPA6NHQ4 379 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 SLC38A8A6NNN8 435 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 RFXAPO00287 272 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 PRRG1O14668 218 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 SART1O43290 800 aaKnown RBP8.42□□□□□ -1.06
CPNE3-209ENST00000620393 CLASP2O75122 1294 aaKnown RBP8.42□□□□□ -1.06
CPNE3-209ENST00000620393 SOAT2O75908 522 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 RTN3O95197 1032 aaPredicted RBP8.42□□□□□ -1.06
CPNE3-209ENST00000620393 GJB6O95452 261 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 GLUD1P00367 558 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 USP17L7P0C7H9 530 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 SPATA31D3P0C874 917 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 YWHAQP27348 245 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 RFC1P35251 1148 aaPredicted RBP8.42□□□□□ -1.06
CPNE3-209ENST00000620393 CLCN4P51793 760 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 SLC5A3P53794 718 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 DAOAP59103 153 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 RNASE9P60153 205 aaKnown RBP8.42□□□□□ -1.06
CPNE3-209ENST00000620393 GNG11P61952 73 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms