RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 SMPD4Q9NXE4 827 aa16.6■□□□□ 0.25
LINC00221-202ENST00000619530 KIAA1468Q9P260 1216 aa16.6■□□□□ 0.25
LINC00221-202ENST00000619530 BECN2A8MW95 431 aa16.59■□□□□ 0.25
LINC00221-202ENST00000619530 SLC16A3O15427 465 aaKnown RBP16.59■□□□□ 0.25
LINC00221-202ENST00000619530 PDE6CP51160 858 aa16.59■□□□□ 0.25
LINC00221-202ENST00000619530 LRRC32Q14392 662 aa16.59■□□□□ 0.25
LINC00221-202ENST00000619530 ZNF77Q15935 545 aa16.59■□□□□ 0.25
LINC00221-202ENST00000619530 ZNF394Q53GI3 561 aa16.59■□□□□ 0.25
LINC00221-202ENST00000619530 C1orf228Q6PIY5 440 aa16.59■□□□□ 0.25
LINC00221-202ENST00000619530 SARM1Q6SZW1 724 aa16.59■□□□□ 0.25
LINC00221-202ENST00000619530 CYFIP2Q96F07 1278 aa16.59■□□□□ 0.25
LINC00221-202ENST00000619530 HEXIM2Q96MH2 286 aaKnown RBP16.59■□□□□ 0.25
LINC00221-202ENST00000619530 LINC00597Q9H2U6 94 aa16.59■□□□□ 0.25
LINC00221-202ENST00000619530 CHRDQ9H2X0 955 aa16.59■□□□□ 0.25
LINC00221-202ENST00000619530 ARMCX3Q9UH62 379 aaPredicted RBP16.59■□□□□ 0.25
LINC00221-202ENST00000619530 FBXO4Q9UKT5 387 aa16.59■□□□□ 0.25
LINC00221-202ENST00000619530 ARHGAP26Q9UNA1 814 aa16.59■□□□□ 0.25
LINC00221-202ENST00000619530 PRR23AA6NEV1 266 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 PPP1R3GB7ZBB8 358 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 LEFTY2O00292 366 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 SCAMP3O14828 347 aaKnown RBP16.58■□□□□ 0.24
LINC00221-202ENST00000619530 SLC5A3P53794 718 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 INCA1Q0VD86 236 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 CBWD6Q4V339 395 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 CBWD3Q5JTY5 395 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 CBWD5Q5RIA9 395 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 CPA6Q8N4T0 437 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 ZMIZ2Q8NF64 920 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 OSCP1Q8WVF1 389 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 NELFBQ8WX92 580 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 DNAI2Q9GZS0 605 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 CTNND2Q9UQB3 1225 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 PATJQ8NI35 1801 aa16.58■□□□□ 0.24
LINC00221-202ENST00000619530 TNFRSF10BO14763 440 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 CILPO75339 1184 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 FAM200BP0CF97 657 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 MBL2P11226 248 aaPredicted RBP16.57■□□□□ 0.24
LINC00221-202ENST00000619530 BMP6P22004 513 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 STX17P56962 302 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 MCCD1P59942 119 aaPredicted RBP16.57■□□□□ 0.24
LINC00221-202ENST00000619530 ZXDBP98169 803 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 LRMPQ12912 555 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 MORC3Q14149 939 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 CCDC40Q4G0X9 1142 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 DGKKQ5KSL6 1271 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 ZC3H14Q6PJT7 736 aaKnown RBP16.57■□□□□ 0.24
LINC00221-202ENST00000619530 Q6ZS52 159 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 ZC3H3Q8IXZ2 948 aaKnown RBP16.57■□□□□ 0.24
LINC00221-202ENST00000619530 DRC7Q8IY82 874 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 AOPEPQ8N6M6 819 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 WHAMMQ8TF30 809 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 ATRIPQ8WXE1 791 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 ZNF830Q96NB3 372 aaPredicted RBP16.57■□□□□ 0.24
LINC00221-202ENST00000619530 ARID3AQ99856 593 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 DUSP9Q99956 384 aaKnown RBP16.57■□□□□ 0.24
LINC00221-202ENST00000619530 BPIFA3Q9BQP9 254 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 CISHQ9NSE2 258 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 GMIPQ9P107 970 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 CPQQ9Y646 472 aa16.57■□□□□ 0.24
LINC00221-202ENST00000619530 PTPRZ1P23471 2315 aaPredicted RBP16.56■□□□□ 0.24
LINC00221-202ENST00000619530 PFKLP17858 780 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 CXCL12P48061 93 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 GALK1P51570 392 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 AMPD2Q01433 879 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 SATB1Q01826 763 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 GRSF1Q12849 480 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC00221-202ENST00000619530 USP4Q13107 963 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 ZNF528Q3MIS6 628 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 HECTD3Q5T447 861 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 NAIF1Q69YI7 327 aaPredicted RBP16.56■□□□□ 0.24
LINC00221-202ENST00000619530 DHX40Q8IX18 779 aaKnown RBP16.56■□□□□ 0.24
LINC00221-202ENST00000619530 PDZD8Q8NEN9 1154 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 ATP2A3Q93084 1043 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 HNRNPABQ99729 332 aaKnown RBP16.56■□□□□ 0.24
LINC00221-202ENST00000619530 ECT2Q9H8V3 914 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 CFAP97Q9P2B7 532 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 ATG2BQ96BY7 2078 aa16.56■□□□□ 0.24
LINC00221-202ENST00000619530 COCHO43405 550 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 OAS1P00973 400 aaKnown RBP16.55■□□□□ 0.24
LINC00221-202ENST00000619530 PPP1R2P41236 205 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 PGFP49763 221 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 CCR3P51677 355 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 SLC7A9P82251 487 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 GAS6Q14393 721 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 EML3Q32P44 896 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 PPP1R26Q5T8A7 1209 aaPredicted RBP16.55■□□□□ 0.24
LINC00221-202ENST00000619530 FSTL4Q6MZW2 842 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 FILIP1Q7Z7B0 1213 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 CHFRQ96EP1 664 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 CEP63Q96MT8 703 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 NACA2Q9H009 215 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 CCSER2Q9H7U1 834 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 METTL14Q9HCE5 456 aaKnown RBP16.55■□□□□ 0.24
LINC00221-202ENST00000619530 FBRSL1Q9HCM7 1045 aaKnown RBP16.55■□□□□ 0.24
LINC00221-202ENST00000619530 CSNK1G1Q9HCP0 422 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 COMMD8Q9NX08 183 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 IL37Q9NZH6 218 aa16.55■□□□□ 0.24
LINC00221-202ENST00000619530 LMNAP02545 664 aaKnown RBP16.54■□□□□ 0.24
LINC00221-202ENST00000619530 GJA4P35212 333 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 TPM4P67936 248 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms