RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	HES2	Q9Y543	173 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	SNX9	Q9Y5X1	595 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	BRCA1	P38398	1863 aa	Known RBP	11.69	□□□□□ -0.54
TP53-223	ENST00000618944	ASB14	A6NK59	587 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	NDC80	O14777	642 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	HCRT	O43612	131 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	TSPAN1	O60635	241 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	EDF1	O60869	148 aa	Known RBP	11.69	□□□□□ -0.54
TP53-223	ENST00000618944	FAM155B	O75949	473 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	IL4R	P24394	825 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	GSC	P56915	257 aa	Predicted RBP	11.69	□□□□□ -0.54
TP53-223	ENST00000618944	OVGP1	Q12889	678 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	CA9	Q16790	459 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	FAM187B	Q17R55	369 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	KIZ	Q2M2Z5	673 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	MTHFD1L	Q6UB35	978 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	LCLAT1	Q6UWP7	414 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	OTOA	Q7RTW8	1153 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	C7orf31	Q8N865	590 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	CFAP36	Q96G28	342 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	RNF157	Q96PX1	679 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	NPHS2	Q9NP85	383 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	ARHGEF3	Q9NR81	526 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	CHKB	Q9Y259	395 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	WDR90	Q96KV7	1748 aa		11.69	□□□□□ -0.54
TP53-223	ENST00000618944	KBTBD13	C9JR72	458 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944		E7ESA3	106 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	MT-ND3	P03897	115 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	TFE3	P19532	575 aa	Predicted RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	TARS	P26639	723 aa	Known RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	RBL1	P28749	1068 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	STIP1	P31948	543 aa	Known RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	FAAP100	Q0VG06	881 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	ACVR2B	Q13705	512 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	ACAP1	Q15027	740 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	SETDB1	Q15047	1291 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	NOMO1	Q15155	1222 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	KLHL38	Q2WGJ6	581 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	KBTBD12	Q3ZCT8	623 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	GLRA4	Q5JXX5	417 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	MAMDC4	Q6UXC1	1216 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	PRPF39	Q86UA1	669 aa	Known RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	PLD5	Q8N7P1	536 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	FAM172A	Q8WUF8	416 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	TMEM237	Q96Q45	408 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	LRRC37B	Q96QE4	947 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	USP29	Q9HBJ7	922 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	SNTG2	Q9NY99	539 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	RNF181	Q9P0P0	153 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	HAO1	Q9UJM8	370 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	DCTN4	Q9UJW0	460 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	ITGA11	Q9UKX5	1188 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	KCNH4	Q9UQ05	1017 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	TCRBV9S1A1T	A0A576	114 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944		H3BRB1	525 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	NPTXR	O95502	500 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	ADORA2A	P29274	412 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	GJA5	P36382	358 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	SLC18A1	P54219	525 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	ATXN1	P54253	815 aa	Known RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	PPIL2	Q13356	520 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	PREPL	Q4J6C6	727 aa	Predicted RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	ZNF449	Q6P9G9	518 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	ASRGL1	Q7L266	308 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	FASTKD5	Q7L8L6	764 aa	Known RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	TTC30A	Q86WT1	665 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	AGGF1	Q8N302	714 aa	eCLIP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	LINC01465	Q8N7H1	131 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	MZB1	Q8WU39	189 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	SERAC1	Q96JX3	654 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	ZMAT2	Q96NC0	199 aa	Known RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	C16orf70	Q9BSU1	422 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	DHRS4	Q9BTZ2	278 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	TUT1	Q9H6E5	874 aa	Known RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	YY1AP1	Q9H869	796 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	VRTN	Q9H8Y1	702 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	GBA2	Q9HCG7	927 aa	Predicted RBP	11.68	□□□□□ -0.54
TP53-223	ENST00000618944	IKBKG	Q9Y6K9	419 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	USH1C	Q9Y6N9	552 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944	EVPL	Q92817	2033 aa		11.68	□□□□□ -0.54
TP53-223	ENST00000618944		A0A1B0GUA9	196 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	GABBR2	O75899	941 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	ENDOD1	O94919	500 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	UNC5C	O95185	931 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	ZWINT	O95229	277 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	PDGFRB	P09619	1106 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	ATP2A2	P16615	1042 aa	Known RBP	11.67	□□□□□ -0.54
TP53-223	ENST00000618944	YARS	P54577	528 aa	Known RBP	11.67	□□□□□ -0.54
TP53-223	ENST00000618944	BCAR1	P56945	870 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	POU5F1B	Q06416	359 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	INCA1	Q0VD86	236 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	PTK7	Q13308	1070 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	TFDP2	Q14188	446 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	ACCSL	Q4AC99	568 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	CCDC91	Q7Z6B0	441 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	CTAGE3P	Q8IX95	158 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	PQLC3	Q8N755	202 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms