RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 PBXIP1Q96AQ6 731 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 ZFRQ96KR1 1074 aaKnown RBP8.72□□□□□ -1.01
NEK3-209ENST00000618856 SLITRK1Q96PX8 696 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 CYP2S1Q96SQ9 504 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 CRACR2AQ9BSW2 395 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 OSBPL6Q9BZF3 934 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 SMG9Q9H0W8 520 aaKnown RBP8.72□□□□□ -1.01
NEK3-209ENST00000618856 FBXO44Q9H4M3 255 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 CYLDQ9NQC7 956 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 ARHGEF3Q9NR81 526 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 DLGAP2Q9P1A6 1054 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 TSPAN16Q9UKR8 245 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.72□□□□□ -1.01
NEK3-209ENST00000618856 ZDBF2Q9HCK1 2354 aa8.72□□□□□ -1.01
NEK3-209ENST00000618856 TRAV19A0A0A6YYK7 116 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 XPO1O14980 1071 aaKnown RBP8.71□□□□□ -1.02
NEK3-209ENST00000618856 GREM1O60565 184 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 CLSTN1O94985 981 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 LETM1O95202 739 aaPredicted RBP8.71□□□□□ -1.02
NEK3-209ENST00000618856 USP17L7P0C7H9 530 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 SETSIPP0DME0 302 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 HDCP19113 662 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 AOC1P19801 751 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 GDI1P31150 447 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 AVPR1AP37288 418 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 MFAP3P55082 362 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 PLCB2Q00722 1185 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 APBA1Q02410 837 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 PDE4CQ08493 712 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 FZD5Q13467 585 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 GRM2Q14416 872 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 KRT31Q15323 416 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 MLF2Q15773 248 aaPredicted RBP8.71□□□□□ -1.02
NEK3-209ENST00000618856 CAVIN1Q6NZI2 390 aaKnown RBP8.71□□□□□ -1.02
NEK3-209ENST00000618856 GJB7Q6PEY0 223 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 SCD5Q86SK9 330 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 PIGZQ86VD9 579 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 DHX40Q8IX18 779 aaKnown RBP8.71□□□□□ -1.02
NEK3-209ENST00000618856 SIX5Q8N196 739 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 RBBP8NLQ8NC74 664 aaPredicted RBP8.71□□□□□ -1.02
NEK3-209ENST00000618856 CHFRQ96EP1 664 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 MSANTD3Q96H12 275 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 KCNH6Q9H252 994 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 SLITRK6Q9H5Y7 841 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 NMUR1Q9HB89 426 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 UBE2TQ9NPD8 197 aaPredicted RBP8.71□□□□□ -1.02
NEK3-209ENST00000618856 PLCB1Q9NQ66 1216 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 OSER1Q9NX31 292 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 CLIC5Q9NZA1 410 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 CHORDC1Q9UHD1 332 aaPredicted RBP8.71□□□□□ -1.02
NEK3-209ENST00000618856 AJAP1Q9UKB5 411 aaPredicted RBP8.71□□□□□ -1.02
NEK3-209ENST00000618856 PCDHB4Q9Y5E5 795 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 HELZP42694 1942 aaKnown RBP8.71□□□□□ -1.02
NEK3-209ENST00000618856 COL4A3Q01955 1670 aa8.71□□□□□ -1.02
NEK3-209ENST00000618856 KANSL1LA0AUZ9 987 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 TULP2O00295 520 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 ZNF263O14978 683 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 CYP26A1O43174 497 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 COCHO43405 550 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 CKMP06732 381 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 RFX1P22670 979 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 AVPR2P30518 371 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 GPD2P43304 727 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 PSEN1P49768 467 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 BCAT1P54687 386 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 VCPP55072 806 aaKnown RBP8.7□□□□□ -1.02
NEK3-209ENST00000618856 BST2Q10589 180 aaKnown RBP8.7□□□□□ -1.02
NEK3-209ENST00000618856 IQCB1Q15051 598 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 GOLGA7BQ2TAP0 167 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 ANO6Q4KMQ2 910 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 HSP90AA4PQ58FG1 418 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 HECTD3Q5T447 861 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 KLHDC7AQ5VTJ3 777 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 ASTLQ6HA08 431 aaPredicted RBP8.7□□□□□ -1.02
NEK3-209ENST00000618856 C1orf228Q6PIY5 440 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 FAM71AQ8IYT1 594 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 ARL14EPQ8N8R7 260 aaPredicted RBP8.7□□□□□ -1.02
NEK3-209ENST00000618856 TMEM105Q8N8V8 129 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 STK32AQ8WU08 396 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 FBXO32Q969P5 355 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 CLDN23Q96B33 292 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 SHDQ96IW2 340 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 CCSER2Q9H7U1 834 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 BRD9Q9H8M2 597 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 HPS4Q9NQG7 708 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.7□□□□□ -1.02
NEK3-209ENST00000618856 GMIPQ9P107 970 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 CA14Q9ULX7 337 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 SIK3Q9Y2K2 1263 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 DAAM1Q9Y4D1 1078 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 MUC6Q6W4X9 2439 aa8.7□□□□□ -1.02
NEK3-209ENST00000618856 OTOL1A6NHN0 477 aaPredicted RBP8.69□□□□□ -1.02
NEK3-209ENST00000618856 LGALS16A8MUM7 142 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 LEFTY2O00292 366 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 FOXN3O00409 490 aaPredicted RBP8.69□□□□□ -1.02
NEK3-209ENST00000618856 PI15O43692 258 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 UCHL3P15374 230 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 BRD2P25440 801 aaKnown RBP8.69□□□□□ -1.02
NEK3-209ENST00000618856 CLCN1P35523 988 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 COPB1P53618 953 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms