RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 PSMC3IPQ9P2W1 217 aaPredicted RBP12.74□□□□□ -0.37
MATR3-227ENST00000618441 CDC14AQ9UNH5 594 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 ARHGEF37A1IGU5 675 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 hCG_1984214I3L0E3 225 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 PFDN6O15212 129 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 DNAJA2O60884 412 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 GUCY1B2O75343 617 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 MTA2O94776 668 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 CYP2D6P10635 497 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 MAGP20916 626 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 PHKA2P46019 1235 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 PEX3P56589 373 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 FUT2Q10981 343 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 CAMK2BQ13554 666 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 DEPDC1Q5TB30 811 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 WWP1Q9H0M0 922 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 TRPV6Q9H1D0 765 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 TRIM39Q9HCM9 518 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 CEPT1Q9Y6K0 416 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 KATNA1O75449 491 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 EEF1B2P24534 225 aaKnown RBP12.73□□□□□ -0.37
MATR3-227ENST00000618441 GPC5P78333 572 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 NEDD8Q15843 81 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 EDRF1Q3B7T1 1238 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 WDR45BQ5MNZ6 344 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 ZNF618Q5T7W0 954 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 AAGABQ6PD74 315 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 NT5DC4Q86YG4 428 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 SSX2IPQ9Y2D8 614 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 CRYBG1Q9Y4K1 1723 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 E5RJQ4 531 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 AGRPO00253 132 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 RAP1GDS1P52306 607 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 ALCAMQ13740 583 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 RHOT2Q8IXI1 618 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 EBF4Q9BQW3 602 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 DDX28Q9NUL7 540 aaKnown RBP12.73□□□□□ -0.37
MATR3-227ENST00000618441 RABGEF1Q9UJ41 708 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 SPATA31A5Q5VU36 1347 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 SPATA31A7Q8IWB4 1347 aa12.73□□□□□ -0.37
MATR3-227ENST00000618441 ZSCAN5BA6NJL1 495 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 CCDC85CA6NKD9 419 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 COPEO14579 308 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 UQCRFS1P1P0C7P4 283 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 CD58P19256 250 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 JAK1P23458 1154 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 SSTR3P32745 418 aaPredicted RBP12.72□□□□□ -0.37
MATR3-227ENST00000618441 PKNOX1P55347 436 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 PTK7Q13308 1070 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 TBC1D10BQ4KMP7 808 aaPredicted RBP12.72□□□□□ -0.37
MATR3-227ENST00000618441 TJAP1Q5JTD0 557 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 TMTC4Q5T4D3 741 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 GALNT18Q6P9A2 607 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 RNF111Q6ZNA4 994 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 C11orf74Q86VG3 221 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 LARGE2Q8N3Y3 721 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 TTC13Q8NBP0 860 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 PNMA1Q8ND90 353 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 C6orf50Q9HD87 102 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 WDR6Q9NNW5 1121 aaKnown RBP12.72□□□□□ -0.37
MATR3-227ENST00000618441 ANAPC7Q9UJX3 599 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 FAM47E-STBD1D6RA91 191 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 CCRL2O00421 344 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 TEX28O15482 410 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 AKAP3O75969 853 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 INHBAP08476 426 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 CLK3P49761 638 aaKnown RBP12.72□□□□□ -0.37
MATR3-227ENST00000618441 MXI1P50539 228 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 COPAP53621 1224 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 DYNLT1P63172 113 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 KRT72Q14CN4 511 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 ODR4Q5SWX8 454 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 C3orf62Q6ZUJ4 267 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 AMIGO3Q86WK7 504 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 C12orf50Q8NA57 414 aaPredicted RBP12.72□□□□□ -0.37
MATR3-227ENST00000618441 C12orf43Q96C57 262 aaKnown RBP12.72□□□□□ -0.37
MATR3-227ENST00000618441 ISCA1Q9BUE6 129 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 C10orf88Q9H8K7 445 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 TRPC5Q9UL62 973 aaPredicted RBP12.72□□□□□ -0.37
MATR3-227ENST00000618441 FOXN3O00409 490 aaPredicted RBP12.72□□□□□ -0.37
MATR3-227ENST00000618441 TMEM127O75204 238 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 MYO1DO94832 1006 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 CSF1RP07333 972 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 MUTP22033 750 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 NR4A2P43354 598 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 ARSEP51690 589 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 TFAP4Q01664 338 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 FAM209AQ5JX71 171 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 INTS5Q6P9B9 1019 aaKnown RBP12.72□□□□□ -0.37
MATR3-227ENST00000618441 USP37Q86T82 979 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 C7orf43Q8WVR3 580 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 PNMA5Q96PV4 448 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 CCDC68Q9H2F9 335 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 EPS8L2Q9H6S3 715 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 GRXCR2A6NFK2 248 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 BTNL10A8MVZ5 291 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 POTECB2RU33 542 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 SGK1O00141 431 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 PDE8AO60658 829 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 RALAP11233 206 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms