RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ENO3P13929 434 aaPredicted RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 SERPINB5P36952 375 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 LIG4P49917 911 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 MAP3K10Q02779 954 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 DMP1Q13316 513 aaPredicted RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 MPP3Q13368 585 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 CDO1Q16878 200 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 ABCB5Q2M3G0 1257 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 TFDP3Q5H9I0 405 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 KRT80Q6KB66 452 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 PCGF5Q86SE9 256 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 RBM12BQ8IXT5 1001 aaKnown RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 SPATA18Q8TC71 538 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 DCAKDQ8WVC6 231 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 PGBD4Q96DM1 585 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 IMPG2Q9BZV3 1241 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 XAB2Q9HCS7 855 aaKnown RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 XPNPEP1Q9NQW7 623 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 BLOC1S6Q9UL45 172 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 PCDHAC2Q9Y5I4 1007 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 ROBO1Q9Y6N7 1651 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 SPATA31A1Q5TZJ5 1347 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 PSMD10O75832 226 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 SEC24DO94855 1032 aaPredicted RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 SAT1P21673 171 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 FDFT1P37268 417 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 NUDT2P50583 147 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 HDAC4P56524 1084 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 TLR1Q15399 786 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 RARS2Q5T160 578 aaKnown RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 DPY19L2Q6NUT2 758 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 MOXD1Q6UVY6 613 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 NPNTQ6UXI9 565 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 ZFP28Q8NHY6 868 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 ZSCAN18Q8TBC5 510 aaPredicted RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 DDX1Q92499 740 aaKnown RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 HAPLN3Q96S86 360 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 RMI1Q9H9A7 625 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 EHMT1Q9H9B1 1298 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 PFDN4Q9NQP4 134 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 NDUFA13Q9P0J0 144 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 HERC5Q9UII4 1024 aaKnown RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 PRR12Q9ULL5 1215 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 STRIP2Q9ULQ0 834 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 PCDHGB4Q9UN71 923 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 PLA2G4CQ9UP65 541 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 PCDHGB5Q9Y5G0 923 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 AP4B1Q9Y6B7 739 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 ZHX2Q9Y6X8 837 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 A0A088AWK7 358 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 XPOTO43592 962 aaKnown RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 FGFR3P22607 806 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 GTF2H1P32780 548 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 MAPK10P53779 464 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 NAA20P61599 178 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 IGBP1P78318 339 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 MSLNQ13421 630 aaPredicted RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 MYLK3Q32MK0 819 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 SH3D19Q5HYK7 790 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 TTC39BQ5VTQ0 682 aaPredicted RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 ITPRIPL1Q6GPH6 555 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 CDC42EP5Q6NZY7 148 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 FBXL19Q6PCT2 694 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 SLC9A9Q8IVB4 645 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 DEPDC1BQ8WUY9 529 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 PPWD1Q96BP3 646 aaKnown RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 DCUN1D1Q96GG9 259 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 CCDC17Q96LX7 622 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 SEMA6AQ9H2E6 1030 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 AVENQ9NQS1 362 aaPredicted RBP6.93□□□□□ -1.3
LMO3-235ENST00000616247 ARHGEF4Q9NR80 690 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 PNPOQ9NVS9 261 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 PTTG2Q9NZH5 202 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 TXNDC16Q9P2K2 825 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 ZNF180Q9UJW8 692 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 POMPQ9Y244 141 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 GLI3P10071 1580 aa6.93□□□□□ -1.3
LMO3-235ENST00000616247 TESPA1A2RU30 521 aaPredicted RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 CXorf49A8MYA2 514 aaPredicted RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 STRNO43815 780 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 GRIN3BO60391 1043 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 TRMUO75648 421 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 KRT38O76015 456 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 PENKP01210 267 aaPredicted RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 CD48P09326 243 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 UNGP13051 313 aaPredicted RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 EIF2AK2P19525 551 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 PCSK6P29122 969 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 ADSSP30520 456 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 YWHABP31946 246 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 MAGEA8P43361 318 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 RARRES1P49788 294 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 STAT2P52630 851 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 SLC18A1P54219 525 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 ORC1Q13415 861 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 SLC15A2Q16348 729 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 HADHQ16836 314 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 FASTKD1Q53R41 847 aaKnown RBP6.92□□□□□ -1.3
LMO3-235ENST00000616247 LPCAT2Q7L5N7 544 aa6.92□□□□□ -1.3
LMO3-235ENST00000616247 ZNF554Q86TJ5 538 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms