RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 XPO1O14980 1071 aaKnown RBP8.47□□□□□ -1.05
PCDH9-205ENST00000614931 FANCGO15287 622 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 TEX28O15482 410 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 MOCS3O95396 460 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 SEC24AO95486 1093 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 CYP1A2P05177 515 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 TMEM253P0C7T8 217 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 FAM200BP0CF97 657 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 SETSIPP0DME0 302 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 RRM1P23921 792 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 KLRC2P26717 231 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 MTHFRP42898 656 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 NSFP46459 744 aaKnown RBP8.47□□□□□ -1.05
PCDH9-205ENST00000614931 PLA2G4AP47712 749 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 GABRB2P47870 512 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 CLCN4P51793 760 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 KRT83P78385 493 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 C1QBPQ07021 282 aaKnown RBP8.47□□□□□ -1.05
PCDH9-205ENST00000614931 GPR17Q13304 367 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 KIAA1841Q6NSI8 718 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 ZNF662Q6ZS27 426 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 FAM183BPQ6ZVS7 135 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 PIGZQ86VD9 579 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 ERICH1Q86X53 443 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 CPNE8Q86YQ8 564 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 SPATA2LQ8IUW3 424 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-205ENST00000614931 GPR65Q8IYL9 337 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 DCP1BQ8IZD4 617 aaKnown RBP8.47□□□□□ -1.05
PCDH9-205ENST00000614931 C12orf76Q8N812 135 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-205ENST00000614931 CLEC4CQ8WTT0 213 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 NDRG1Q92597 394 aaKnown RBP8.47□□□□□ -1.05
PCDH9-205ENST00000614931 EDAQ92838 391 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 SMARCD1Q96GM5 515 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 RPGRIP1Q96KN7 1286 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 KCNK16Q96T55 309 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 SLC4A5Q9BY07 1137 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 CSNK1G1Q9HCP0 422 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 OSGEPQ9NPF4 335 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 ADAM22Q9P0K1 906 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 MYO1AQ9UBC5 1043 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 HESX1Q9UBX0 185 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 RAPGEFL1Q9UHV5 662 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 CDH22Q9UJ99 828 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 INTUQ9ULD6 942 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 ARIH1Q9Y4X5 557 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-205ENST00000614931 PAXBP1Q9Y5B6 917 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 PCDHB5Q9Y5E4 795 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 CAPN6Q9Y6Q1 641 aa8.47□□□□□ -1.05
PCDH9-205ENST00000614931 MACROD2A1Z1Q3 448 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 BTNL10A8MVZ5 291 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 ESPNB1AK53 854 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 GOLGA8SH3BPF8 625 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 TNFRSF10BO14763 440 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 PAPSS1O43252 624 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-205ENST00000614931 ZSCAN12O43309 604 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 BUB1O43683 1085 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 ABLIM3O94929 683 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 IPO7O95373 1038 aaKnown RBP8.46□□□□□ -1.06
PCDH9-205ENST00000614931 C1RP00736 705 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 ADH1AP07327 375 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 HAPLN1P10915 354 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-205ENST00000614931 ATF6P18850 670 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 MAGEA11P43364 429 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 GSCP56915 257 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-205ENST00000614931 ADCY1Q08828 1119 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 ZNF252P-AS1Q0IIN9 211 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 ADIGQ0VDE8 80 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 MAPRE1Q15691 268 aaKnown RBP8.46□□□□□ -1.06
PCDH9-205ENST00000614931 NFE2Q16621 373 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-205ENST00000614931 CFAP221Q4G0U5 840 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 RAB41Q5JT25 222 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 PPP1R15BQ5SWA1 713 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 RARS2Q5T160 578 aaKnown RBP8.46□□□□□ -1.06
PCDH9-205ENST00000614931 C10orf76Q5T2E6 689 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 PLEKHA7Q6IQ23 1121 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 TRNP1Q6NT89 227 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 C4orf50Q6ZRC1 276 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 BHLHA9Q7RTU4 235 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 GPR149Q86SP6 731 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 TMEM110Q86TL2 294 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 JOSD2Q8TAC2 188 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 STK32AQ8WU08 396 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 RFFLQ8WZ73 363 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 MCRS1Q96EZ8 462 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 FUBP3Q96I24 572 aaKnown RBP eCLIP8.46□□□□□ -1.06
PCDH9-205ENST00000614931 BTBD6Q96KE9 485 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 RIPOR3Q96MK2 946 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 GOLPH3Q9H4A6 298 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 POMKQ9H5K3 350 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 SFXN1Q9H9B4 322 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 DMAP1Q9NPF5 467 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-205ENST00000614931 AVENQ9NQS1 362 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-205ENST00000614931 ST7Q9NRC1 585 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 FNIP2Q9P278 1114 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 CNOT8Q9UFF9 292 aaKnown RBP8.46□□□□□ -1.06
PCDH9-205ENST00000614931 GUCA1BQ9UMX6 200 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 SLC27A5Q9Y2P5 690 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 CEP83Q9Y592 693 aa8.46□□□□□ -1.06
PCDH9-205ENST00000614931 DENND4AQ7Z401 1863 aa8.45□□□□□ -1.06
PCDH9-205ENST00000614931 HELZP42694 1942 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms