RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 FBXO47Q5MNV8 452 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 SPOCD1Q6ZMY3 1216 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 NLRP9Q7RTR0 991 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 KATNAL2Q8IYT4 538 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 C7orf43Q8WVR3 580 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 MPP4Q96JB8 637 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 TRIM51Q9BSJ1 452 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 MTIF3Q9H2K0 278 aaKnown RBP9.05□□□□□ -0.96
PDE6A-204ENST00000613228 GDF3Q9NR23 364 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 ATP11BQ9Y2G3 1177 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 CCDC166P0CW27 439 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 ESRRAP11474 423 aaPredicted RBP9.05□□□□□ -0.96
PDE6A-204ENST00000613228 STX1BP61266 288 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 PATL1Q86TB9 770 aaKnown RBP9.05□□□□□ -0.96
PDE6A-204ENST00000613228 PHF13Q86YI8 300 aaPredicted RBP9.05□□□□□ -0.96
PDE6A-204ENST00000613228 ICA1LQ8NDH6 482 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 CASKIN2Q8WXE0 1202 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 SPATA17Q96L03 361 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 PACSIN1Q9BY11 444 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 LACRTQ9GZZ8 138 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 ANLNQ9NQW6 1124 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 CHST12Q9NRB3 414 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 CNTNAP1P78357 1384 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 IRS2Q9Y4H2 1338 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 ESYT3A0FGR9 886 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 VTNP04004 478 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 THP07101 528 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 CASP5P51878 434 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 CACNA2D1P54289 1103 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 SKOR1P84550 965 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 POU5F1BQ06416 359 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 ADRM1Q16186 407 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 CBWD6Q4V339 395 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 CBWD3Q5JTY5 395 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 CBWD5Q5RIA9 395 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 KRT80Q6KB66 452 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 CHADLQ6NUI6 762 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 TSHZ1Q6ZSZ6 1077 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 NT5DC3Q86UY8 548 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 TAB3Q8N5C8 712 aaPredicted RBP9.05□□□□□ -0.96
PDE6A-204ENST00000613228 IL31RAQ8NI17 732 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 SLC20A1Q8WUM9 679 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 RBM15Q96T37 977 aaKnown RBP eCLIP9.05□□□□□ -0.96
PDE6A-204ENST00000613228 PNKPQ96T60 521 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 AAASQ9NRG9 546 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 EURLQ9NYK6 297 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 SEPT3Q9UH03 358 aa9.05□□□□□ -0.96
PDE6A-204ENST00000613228 XPO7Q9UIA9 1087 aaKnown RBP9.05□□□□□ -0.96
PDE6A-204ENST00000613228 USP15Q9Y4E8 981 aaPredicted RBP9.05□□□□□ -0.96
PDE6A-204ENST00000613228 TGFB1I1O43294 461 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 NUDCD3Q8IVD9 361 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 ATPAF2Q8N5M1 289 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 ATP6V0D2Q8N8Y2 350 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 NOA1Q8NC60 698 aaKnown RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 SEPT8Q92599 483 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 HINFPQ9BQA5 517 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 DNAAF2Q9NVR5 837 aaKnown RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 CPA4Q9UI42 421 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 PCDHB8Q9UN66 801 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 LAMB2P55268 1798 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 CYB561D2O14569 222 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 KRT8P05787 483 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 ZNF286BP0CG31 522 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 XPAP23025 273 aaPredicted RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 GRM5P41594 1212 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 FSCN1Q16658 493 aaKnown RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 FSCBQ5H9T9 825 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 SHC3Q92529 594 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 CPB2Q96IY4 423 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 LRRC37BQ96QE4 947 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 XPO6Q96QU8 1125 aaKnown RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 PITPNM3Q9BZ71 974 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 MRPL40Q9NQ50 206 aaKnown RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 ZFP69BQ9UJL9 534 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 LZTS1Q9Y250 596 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 SMIM35A0A1B0GVV1 85 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 ARL2P36404 184 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 THPOP40225 353 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 ITGA8P53708 1063 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 ELF3P78545 371 aaPredicted RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 THOC7Q6I9Y2 204 aaKnown RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TIGD7Q6NT04 549 aaPredicted RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 CATSPER1Q8NEC5 780 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TFB1MQ8WVM0 346 aaKnown RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 GLI3P10071 1580 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 C3orf70A6NLC5 250 aaPredicted RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 LACTBL1A8MY62 500 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 HACD1B0YJ81 288 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 ADRB2P07550 413 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 UBTFL6P0CB48 400 aaPredicted RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 CXCL8P10145 99 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 MAGEA4P43358 317 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 NR2C2P49116 596 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 RGS7P49802 495 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 CAPSQ13938 189 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 RPS6KA2Q15349 733 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TREML2Q5T2D2 321 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 DDI1Q8WTU0 396 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 RIN2Q8WYP3 895 aaPredicted RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TSPAN17Q96FV3 270 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms