RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 POLG2Q9UHN1 485 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.05□□□□□ -0.96
TTC28-208ENST00000612946 TRIM43BA6NCK2 446 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 GNA15P30679 374 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 POU5F1BQ06416 359 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 FAM47AQ5JRC9 791 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 POLNQ7Z5Q5 900 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 DEPDC4Q8N2C3 294 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 SH3KBP1Q96B97 665 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 ZNF333Q96JL9 665 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 TRIM9Q9C026 710 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 TMEM114B3SHH9 223 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 GNPATO15228 680 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 SP100P23497 879 aaPredicted RBP9.05□□□□□ -0.96
TTC28-208ENST00000612946 MTA1Q13330 715 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 ANO4Q32M45 955 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 RASSF6Q6ZTQ3 369 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 RDM1Q8NG50 284 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 SSNA1O43805 119 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 RECQL5O94762 991 aaPredicted RBP9.05□□□□□ -0.96
TTC28-208ENST00000612946 ZNF699Q32M78 642 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 C11orf74Q86VG3 221 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 FICDQ9BVA6 458 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 ALOX15P16050 662 aaPredicted RBP9.05□□□□□ -0.96
TTC28-208ENST00000612946 RGS4P49798 205 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 DRG2P55039 364 aaKnown RBP9.05□□□□□ -0.96
TTC28-208ENST00000612946 TMEM26Q6ZUK4 368 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 HSPBP1Q9NZL4 362 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 CLEC11AQ9Y240 323 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 NEDD4P46934 1319 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 MDM4O15151 490 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 KCTD21Q4G0X4 260 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 CEP170P1Q96L14 293 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 TASP1Q9H6P5 420 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 SYTL2Q9HCH5 934 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 FBXO9Q9UK97 447 aaPredicted RBP9.05□□□□□ -0.96
TTC28-208ENST00000612946 PEX16Q9Y5Y5 336 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 FKBP9O95302 570 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 MPOP05164 745 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 PSAPP07602 524 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 STARP49675 285 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 TBCELQ5QJ74 424 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 TRIM65Q6PJ69 517 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 ZDHHC13Q8IUH4 622 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 C2CD2LO14523 706 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 ZBTB24O43167 697 aaPredicted RBP9.04□□□□□ -0.96
TTC28-208ENST00000612946 SNX3O60493 162 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 EYA4O95677 639 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 IREB2P48200 963 aaKnown RBP9.04□□□□□ -0.96
TTC28-208ENST00000612946 SCN1BQ07699 218 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 TNFAIP1Q13829 316 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 INO80DQ53TQ3 878 aaPredicted RBP9.04□□□□□ -0.96
TTC28-208ENST00000612946 CKAP2Q8WWK9 683 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 OSBPL10Q9BXB5 764 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 TAS2R1Q9NYW7 299 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 PKD2L1Q9P0L9 805 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 MYCLP12524 364 aaPredicted RBP9.04□□□□□ -0.96
TTC28-208ENST00000612946 RPL19P84098 196 aaKnown RBP9.04□□□□□ -0.96
TTC28-208ENST00000612946 FAAH2Q6GMR7 532 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 UGT3A1Q6NUS8 523 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 NEK5Q6P3R8 708 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 DCAF4Q8WV16 495 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 DNAAF2Q9NVR5 837 aaKnown RBP9.04□□□□□ -0.96
TTC28-208ENST00000612946 A0A0B4J269 797 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 SEMA3DO95025 777 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 UCHL3P15374 230 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 TUBB3Q13509 450 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 SHC4Q6S5L8 630 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 RYBPQ8N488 228 aaPredicted RBP9.04□□□□□ -0.96
TTC28-208ENST00000612946 TAB3Q8N5C8 712 aaPredicted RBP9.04□□□□□ -0.96
TTC28-208ENST00000612946 ACAT2Q9BWD1 397 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 SLC52A2Q9HAB3 445 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 C3orf18Q9UK00 162 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 MGRN1O60291 552 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 HSD17B4P51659 736 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 CSNK2BP67870 215 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 HPCAP84074 193 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 PDPK2PQ6A1A2 396 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 CCDC28AQ8IWP9 274 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 EXT2Q93063 718 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 ZFP42Q96MM3 310 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 PLEKHF1Q96S99 279 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 CLDN25C9JDP6 229 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 SOAT2O75908 522 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 SERPINA6P08185 405 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 SGF29Q96ES7 293 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 PTCD3Q96EY7 689 aaKnown RBP9.04□□□□□ -0.96
TTC28-208ENST00000612946 FOPNLQ96NB1 174 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 SPATA16Q9BXB7 569 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 UTYO14607 1347 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 MYL12BO14950 172 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 EXTL3O43909 919 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 FAM20BO75063 409 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 DHFRP00374 187 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 P4HBP07237 508 aaKnown RBP9.04□□□□□ -0.96
TTC28-208ENST00000612946 ANPEPP15144 967 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 GLG1Q92896 1179 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 FAM111AQ96PZ2 611 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 ENTPD7Q9NQZ7 604 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 CDH9Q9ULB4 789 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms