RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 IFRD2Q12894 506 aaPredicted RBP24.97■■□□□ 1.59
MMP28-203ENST00000612672 MYO1EQ12965 1108 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 LY6G5CQ5SRR4 150 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 RRAGBQ5VZM2 374 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 LYSMD4Q5XG99 296 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 FAM173BQ6P4H8 233 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 SV2BQ7L1I2 683 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 MIB1Q86YT6 1006 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 ETFBKMTQ8IXQ9 262 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 SPACA7Q96KW9 195 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 IGSF10Q6WRI0 2623 aa24.97■■□□□ 1.59
MMP28-203ENST00000612672 TAF4O00268 1085 aa24.96■■□□□ 1.59
MMP28-203ENST00000612672 TRIM66O15016 1216 aa24.96■■□□□ 1.59
MMP28-203ENST00000612672 MAP3K13O43283 966 aa24.96■■□□□ 1.59
MMP28-203ENST00000612672 CST3P01034 146 aaPredicted RBP24.96■■□□□ 1.59
MMP28-203ENST00000612672 NAT16Q8N8M0 369 aa24.96■■□□□ 1.59
MMP28-203ENST00000612672 CEP295NLQ96MC4 621 aa24.96■■□□□ 1.59
MMP28-203ENST00000612672 POLMQ9NP87 494 aaPredicted RBP24.96■■□□□ 1.59
MMP28-203ENST00000612672 MBL2P11226 248 aaPredicted RBP24.95■■□□□ 1.58
MMP28-203ENST00000612672 GABRG2P18507 467 aa24.95■■□□□ 1.58
MMP28-203ENST00000612672 GRIA2P42262 883 aa24.95■■□□□ 1.58
MMP28-203ENST00000612672 SIM1P81133 766 aaPredicted RBP24.95■■□□□ 1.58
MMP28-203ENST00000612672 MAPRE1Q15691 268 aaKnown RBP24.95■■□□□ 1.58
MMP28-203ENST00000612672 EOGTQ5NDL2 527 aa24.95■■□□□ 1.58
MMP28-203ENST00000612672 KIAA1958Q8N8K9 716 aa24.95■■□□□ 1.58
MMP28-203ENST00000612672 ERLEC1Q96DZ1 483 aa24.95■■□□□ 1.58
MMP28-203ENST00000612672 MMS19Q96T76 1030 aa24.95■■□□□ 1.58
MMP28-203ENST00000612672 PANK2Q9BZ23 570 aa24.95■■□□□ 1.58
MMP28-203ENST00000612672 GZF1Q9H116 711 aaPredicted RBP24.95■■□□□ 1.58
MMP28-203ENST00000612672 CAPN10Q9HC96 672 aa24.95■■□□□ 1.58
MMP28-203ENST00000612672 CD93Q9NPY3 652 aa24.95■■□□□ 1.58
MMP28-203ENST00000612672 PANK4Q9NVE7 773 aa24.95■■□□□ 1.58
MMP28-203ENST00000612672 CCDC39Q9UFE4 941 aa24.95■■□□□ 1.58
MMP28-203ENST00000612672 MSRB2Q9Y3D2 182 aa24.95■■□□□ 1.58
MMP28-203ENST00000612672 SRPRBQ9Y5M8 271 aaKnown RBP24.95■■□□□ 1.58
MMP28-203ENST00000612672 SLC9A3R1O14745 358 aaPredicted RBP24.94■■□□□ 1.58
MMP28-203ENST00000612672 COCHO43405 550 aa24.94■■□□□ 1.58
MMP28-203ENST00000612672 ADH1CP00326 375 aa24.94■■□□□ 1.58
MMP28-203ENST00000612672 TNNC2P02585 160 aa24.94■■□□□ 1.58
MMP28-203ENST00000612672 CFIP05156 583 aa24.94■■□□□ 1.58
MMP28-203ENST00000612672 HSF5Q4G112 596 aaPredicted RBP24.94■■□□□ 1.58
MMP28-203ENST00000612672 HS2ST1Q7LGA3 356 aa24.94■■□□□ 1.58
MMP28-203ENST00000612672 TRAPPC11Q7Z392 1133 aa24.94■■□□□ 1.58
MMP28-203ENST00000612672 GTPBP2Q9BX10 602 aaKnown RBP24.94■■□□□ 1.58
MMP28-203ENST00000612672 B3GNT5Q9BYG0 378 aa24.94■■□□□ 1.58
MMP28-203ENST00000612672 CD248Q9HCU0 757 aa24.94■■□□□ 1.58
MMP28-203ENST00000612672 ADAMTS20P59510 1910 aa24.94■■□□□ 1.58
MMP28-203ENST00000612672 PLXNB3Q9ULL4 1909 aa24.94■■□□□ 1.58
MMP28-203ENST00000612672 CAPNS1P04632 268 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 PTPN1P18031 435 aaKnown RBP24.93■■□□□ 1.58
MMP28-203ENST00000612672 WASP42768 502 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 TNFRSF4P43489 277 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 PGFP49763 221 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 ALCAMQ13740 583 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 DUOXA2Q1HG44 320 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 SLC41A1Q8IVJ1 513 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 BBS7Q8IWZ6 715 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 PGBD3Q8N328 593 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 TRIM9Q9C026 710 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 SLC32A1Q9H598 525 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 HSPBP1Q9NZL4 362 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 CALCOCO1Q9P1Z2 691 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 LHX6Q9UPM6 363 aa24.93■■□□□ 1.58
MMP28-203ENST00000612672 ZNF233A6NK53 670 aa24.92■■□□□ 1.58
MMP28-203ENST00000612672 UPK3BL1B0FP48 263 aa24.92■■□□□ 1.58
MMP28-203ENST00000612672 UPK3BL2E5RIL1 263 aa24.92■■□□□ 1.58
MMP28-203ENST00000612672 TULP3O75386 442 aa24.92■■□□□ 1.58
MMP28-203ENST00000612672 GNL1P36915 607 aaPredicted RBP24.92■■□□□ 1.58
MMP28-203ENST00000612672 PPP3CCP48454 512 aa24.92■■□□□ 1.58
MMP28-203ENST00000612672 RPL6Q02878 288 aaKnown RBP24.92■■□□□ 1.58
MMP28-203ENST00000612672 TDRD10Q5VZ19 366 aaKnown RBP24.92■■□□□ 1.58
MMP28-203ENST00000612672 LRSAM1Q6UWE0 723 aa24.92■■□□□ 1.58
MMP28-203ENST00000612672 WDR49Q8IV35 697 aa24.92■■□□□ 1.58
MMP28-203ENST00000612672 CHCHD4Q8N4Q1 142 aa24.92■■□□□ 1.58
MMP28-203ENST00000612672 SCAMP5Q8TAC9 235 aa24.92■■□□□ 1.58
MMP28-203ENST00000612672 CCSER2Q9H7U1 834 aa24.92■■□□□ 1.58
MMP28-203ENST00000612672 A0A1W2PQF6 199 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 VPS37CA5D8V6 355 aaPredicted RBP24.91■■□□□ 1.58
MMP28-203ENST00000612672 TACC1O75410 805 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 CD59P13987 128 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 CEBPZQ03701 1054 aaKnown RBP24.91■■□□□ 1.58
MMP28-203ENST00000612672 SPDYCQ5MJ68 293 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 TMEM25Q86YD3 366 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 ZNF513Q8N8E2 541 aaPredicted RBP24.91■■□□□ 1.58
MMP28-203ENST00000612672 OR6B3Q8NGW1 331 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 CAMK1GQ96NX5 476 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 SLITRK1Q96PX8 696 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 KCNK16Q96T55 309 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 ACOX2Q99424 681 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 SNX25Q9H3E2 840 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 SLC6A14Q9UN76 642 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 MYH10P35580 1976 aa24.91■■□□□ 1.58
MMP28-203ENST00000612672 GCN1Q92616 2671 aaKnown RBP24.9■■□□□ 1.58
MMP28-203ENST00000612672 IGHV1OR15-9A0A0B4J2B8 117 aa24.9■■□□□ 1.58
MMP28-203ENST00000612672 E2F8A0AVK6 867 aa24.9■■□□□ 1.58
MMP28-203ENST00000612672 HOXC11O43248 304 aaPredicted RBP24.9■■□□□ 1.58
MMP28-203ENST00000612672 DUOXA1Q1HG43 343 aa24.9■■□□□ 1.58
MMP28-203ENST00000612672 EGFLAMQ63HQ2 1017 aa24.9■■□□□ 1.58
MMP28-203ENST00000612672 PAQR9Q6ZVX9 377 aa24.9■■□□□ 1.58
MMP28-203ENST00000612672 MINDY1Q8N5J2 469 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms