RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 RELL1Q8IUW5 271 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 NUDCD3Q8IVD9 361 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 NDUFAF2Q8N183 169 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 PTCD3Q96EY7 689 aaKnown RBP21.27■■□□□ 1
SSBP3-216ENST00000610401 ZC3H7BQ9UGR2 993 aaKnown RBP21.27■■□□□ 1
SSBP3-216ENST00000610401 MAP3K7O43318 606 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 WFS1O76024 890 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 RNF8O76064 485 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 IRX1P78414 480 aaPredicted RBP21.27■■□□□ 1
SSBP3-216ENST00000610401 SLC34A1Q06495 639 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 OR6B2Q6IFH4 312 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 MPP5Q8N3R9 675 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 GSTCDQ8NEC7 633 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 NSUN6Q8TEA1 469 aaKnown RBP21.27■■□□□ 1
SSBP3-216ENST00000610401 TIPINQ9BVW5 301 aa21.27■■□□□ 1
SSBP3-216ENST00000610401 SMAPO00193 183 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 NPM3O75607 178 aaKnown RBP21.26■□□□□ 0.99
SSBP3-216ENST00000610401 KCNA4P22459 653 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 RBL1P28749 1068 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 TGFB2P61812 414 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 ROR1Q01973 937 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 XKR3Q5GH77 459 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 ARMC3Q5W041 872 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 NKD2Q969F2 451 aaPredicted RBP21.26■□□□□ 0.99
SSBP3-216ENST00000610401 USP18Q9UMW8 372 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 SKIP12755 728 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 ABCG1P45844 678 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 NIPA1Q7RTP0 329 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 SMC1BQ8NDV3 1235 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 HEXIM2Q96MH2 286 aaKnown RBP21.26■□□□□ 0.99
SSBP3-216ENST00000610401 DRG1Q9Y295 367 aaKnown RBP21.26■□□□□ 0.99
SSBP3-216ENST00000610401 DOCK5Q9H7D0 1870 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 BRCA2P51587 3418 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 SYNJ2BP-COX16A0A087WUM0 186 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 C3orf70A6NLC5 250 aaPredicted RBP21.26■□□□□ 0.99
SSBP3-216ENST00000610401 CXCL8P10145 99 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 SLC25A11Q02978 314 aaKnown RBP21.26■□□□□ 0.99
SSBP3-216ENST00000610401 KRT81Q14533 505 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 CES3Q6UWW8 571 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 C12orf29Q8N999 325 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 PEBP4Q96S96 227 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 NIF3L1Q9GZT8 377 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 COX16Q9P0S2 106 aa21.26■□□□□ 0.99
SSBP3-216ENST00000610401 ASS1P00966 412 aaKnown RBP21.25■□□□□ 0.99
SSBP3-216ENST00000610401 PHKA2P46019 1235 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 PAPOLAP51003 745 aaKnown RBP21.25■□□□□ 0.99
SSBP3-216ENST00000610401 MRPS35P82673 323 aaKnown RBP21.25■□□□□ 0.99
SSBP3-216ENST00000610401 VWA5B1Q5TIE3 1220 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 RASIP1Q5U651 963 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 ABHD15Q6UXT9 468 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 RIPOR1Q6ZS17 1223 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 CEP128Q6ZU80 1094 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 VCPIP1Q96JH7 1222 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 ADPGKQ9BRR6 497 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 MIS12Q9H081 205 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 RALGPS1Q5JS13 557 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 AP1ARQ63HQ0 302 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 SH3TC2Q8TF17 1288 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 MZB1Q8WU39 189 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 PPP1R13LQ8WUF5 828 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 SMYD2Q9NRG4 433 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 PPM1HQ9ULR3 514 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 GINS2Q9Y248 185 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 GJA3Q9Y6H8 435 aa21.25■□□□□ 0.99
SSBP3-216ENST00000610401 MSX2P35548 267 aaPredicted RBP21.24■□□□□ 0.99
SSBP3-216ENST00000610401 RPL10AP62906 217 aaKnown RBP21.24■□□□□ 0.99
SSBP3-216ENST00000610401 MCL1Q07820 350 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 PRKD1Q15139 912 aaPredicted RBP21.24■□□□□ 0.99
SSBP3-216ENST00000610401 DUOXA2Q1HG44 320 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 APOPT1Q96IL0 206 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 VPS11Q9H270 941 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 HMGCRP04035 888 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 OATP04181 439 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 GTF2A2P52657 109 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 ATXN1P54253 815 aaKnown RBP21.24■□□□□ 0.99
SSBP3-216ENST00000610401 TMEM132BQ14DG7 1078 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 E2F7Q96AV8 911 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 LPIN3Q9BQK8 851 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 KRT82Q9NSB4 513 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 SUPT20HL2P0C7V6 817 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 SUPT20HL1Q3ZLR7 823 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 WDR78Q5VTH9 848 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 FOXB2Q5VYV0 432 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 RGS9BPQ6ZS82 235 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 ENDOVQ8N8Q3 282 aaKnown RBP21.24■□□□□ 0.99
SSBP3-216ENST00000610401 SLC26A7Q8TE54 656 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 FOXP3Q9BZS1 431 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 PORCNQ9H237 461 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 VCXQ9H320 206 aa21.24■□□□□ 0.99
SSBP3-216ENST00000610401 DDX56Q9NY93 547 aaKnown RBP21.24■□□□□ 0.99
SSBP3-216ENST00000610401 TRPC5Q9UL62 973 aaPredicted RBP21.24■□□□□ 0.99
SSBP3-216ENST00000610401 CCDC78A2IDD5 438 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 C6orf222P0C671 652 aaPredicted RBP21.23■□□□□ 0.99
SSBP3-216ENST00000610401 PDGFRAP16234 1089 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 HSF5Q4G112 596 aaPredicted RBP21.23■□□□□ 0.99
SSBP3-216ENST00000610401 LPCAT4Q643R3 524 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 CIAPIN1Q6FI81 312 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 DENND5BQ6ZUT9 1274 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 SKA1Q96BD8 255 aa21.23■□□□□ 0.99
SSBP3-216ENST00000610401 PDLIM7Q9NR12 457 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms