RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 ARFGAP1Q8N6T3 406 aa12.15□□□□□ -0.46
CTCFL-221ENST00000608903 OXCT2Q9BYC2 517 aaPredicted RBP12.15□□□□□ -0.46
CTCFL-221ENST00000608903 CYLDQ9NQC7 956 aa12.15□□□□□ -0.46
CTCFL-221ENST00000608903 MRPL17Q9NRX2 175 aaKnown RBP12.15□□□□□ -0.46
CTCFL-221ENST00000608903 ANAPC7Q9UJX3 599 aa12.15□□□□□ -0.46
CTCFL-221ENST00000608903 ATG2AQ2TAZ0 1938 aa12.15□□□□□ -0.46
CTCFL-221ENST00000608903 PLXNA3P51805 1871 aa12.15□□□□□ -0.47
CTCFL-221ENST00000608903 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.14□□□□□ -0.47
CTCFL-221ENST00000608903 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.14□□□□□ -0.47
CTCFL-221ENST00000608903 CTAGE9A4FU28 777 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 CARNS1A5YM72 827 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 FSCN2O14926 492 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 ATP1A1P05023 1023 aaKnown RBP12.14□□□□□ -0.47
CTCFL-221ENST00000608903 FYNP06241 537 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 USP17L7P0C7H9 530 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 SPATA31D3P0C874 917 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 ATF6P18850 670 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 TFE3P19532 575 aaPredicted RBP12.14□□□□□ -0.47
CTCFL-221ENST00000608903 FLT3P36888 993 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 MTMR3Q13615 1198 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 FAM102AQ5T9C2 384 aaPredicted RBP12.14□□□□□ -0.47
CTCFL-221ENST00000608903 SPATA31D4Q6ZUB0 917 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 KRT222Q8N1A0 295 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 MNS1Q8NEH6 495 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 ZNF461Q8TAF7 563 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 IPO4Q8TEX9 1081 aaKnown RBP12.14□□□□□ -0.47
CTCFL-221ENST00000608903 C8orf48Q96LL4 319 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 KLHL5Q96PQ7 755 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 TCF25Q9BQ70 676 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 TLR10Q9BXR5 811 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 FNIP2Q9P278 1114 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 STRIP2Q9ULQ0 834 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 LZTS1Q9Y250 596 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 ALG6Q9Y672 507 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 USP3Q9Y6I4 520 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 LAMA3Q16787 3333 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 C2orf71A6NGG8 1288 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 KRT3P12035 628 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 TCF4P15884 667 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 ACADSBP45954 432 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 DAOAP59103 153 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 RNASE9P60153 205 aaKnown RBP12.14□□□□□ -0.47
CTCFL-221ENST00000608903 MRPS5P82675 430 aaKnown RBP12.14□□□□□ -0.47
CTCFL-221ENST00000608903 AMPD2Q01433 879 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 SH3PXD2AQ5TCZ1 1133 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 VSTM1Q6UX27 236 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 TMC7Q7Z402 723 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 NT5DC3Q86UY8 548 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 GPR65Q8IYL9 337 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 SPPL2BQ8TCT7 592 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
CTCFL-221ENST00000608903 NAPGQ99747 312 aaPredicted RBP12.14□□□□□ -0.47
CTCFL-221ENST00000608903 SELENOOQ9BVL4 669 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 LRRC4Q9HBW1 653 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 WDR35Q9P2L0 1181 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 AFF4Q9UHB7 1163 aaKnown RBP12.14□□□□□ -0.47
CTCFL-221ENST00000608903 CDC23Q9UJX2 597 aa12.14□□□□□ -0.47
CTCFL-221ENST00000608903 PDE4DIPQ5VU43 2346 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 C2CD4BA6NLJ0 364 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 YJEFN3A6XGL0 299 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 EFCAB8A8MWE9 144 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 E7ENQ6 273 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 COMTP21964 271 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 SLC5A3P53794 718 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 PITX1P78337 314 aaPredicted RBP12.13□□□□□ -0.47
CTCFL-221ENST00000608903 MGAT5BQ3V5L5 792 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 MEI1Q5TIA1 1274 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 PLPP4Q5VZY2 271 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 PM20D1Q6GTS8 502 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 LILRA6Q6PI73 481 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 RSRC2Q7L4I2 434 aaKnown RBP12.13□□□□□ -0.47
CTCFL-221ENST00000608903 DAAM2Q86T65 1068 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 MRPL43Q8N983 215 aaKnown RBP12.13□□□□□ -0.47
CTCFL-221ENST00000608903 TRIM58Q8NG06 486 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 GIPC2Q8TF65 315 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 SEPT5Q99719 369 aaPredicted RBP12.13□□□□□ -0.47
CTCFL-221ENST00000608903 MRPL47Q9HD33 250 aaKnown RBP12.13□□□□□ -0.47
CTCFL-221ENST00000608903 IL37Q9NZH6 218 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 CALCOCO1Q9P1Z2 691 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 SCINQ9Y6U3 715 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 ZNF638Q14966 1978 aaKnown RBP12.13□□□□□ -0.47
CTCFL-221ENST00000608903 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.13□□□□□ -0.47
CTCFL-221ENST00000608903 RB1P06400 928 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 ATF2P15336 505 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 MARCKSL1P49006 195 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 SLC8A3P57103 927 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 TAS2R40P59535 323 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 C11orf63Q6NUN7 778 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 SLC26A9Q7LBE3 791 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 SCD5Q86SK9 330 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 MSANTD4Q8NCY6 345 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 RXFP2Q8WXD0 754 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 CD101Q93033 1021 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 PNPLA8Q9NP80 782 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 RWDD3Q9Y3V2 267 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 IRAK3Q9Y616 596 aa12.13□□□□□ -0.47
CTCFL-221ENST00000608903 COL4A4P53420 1690 aaPredicted RBP12.12□□□□□ -0.47
CTCFL-221ENST00000608903 H3BNC9 293 aa12.12□□□□□ -0.47
CTCFL-221ENST00000608903 RFXAPO00287 272 aa12.12□□□□□ -0.47
CTCFL-221ENST00000608903 DDX3YO15523 660 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms