RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 AFMP43652 599 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 CACNA2D1P54289 1103 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 ZNF252P-AS1Q0IIN9 211 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 E2F4Q16254 413 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 ANO4Q32M45 955 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 ZNF667Q5HYK9 610 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 HECTD3Q5T447 861 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 UNC13DQ70J99 1090 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 LPCAT2Q7L5N7 544 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 ADGRG2Q8IZP9 1017 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 NAT16Q8N8M0 369 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 RLN3Q8WXF3 142 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 B3GNT5Q9BYG0 378 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 SMYD3Q9H7B4 428 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 FAM13BQ9NYF5 915 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 CHORDC1Q9UHD1 332 aaPredicted RBP15.79■□□□□ 0.12
CTSA-216ENST00000607212 NME7Q9Y5B8 376 aa15.79■□□□□ 0.12
CTSA-216ENST00000607212 MAP1BP46821 2468 aaKnown RBP15.78■□□□□ 0.12
CTSA-216ENST00000607212 TCRBV21S2A2A0A5A6 115 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 LNP1A1A4G5 178 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 TBC1D3BA6NDS4 549 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 PATE3B3GLJ2 98 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 K7ELQ4 463 aaPredicted RBP15.78■□□□□ 0.12
CTSA-216ENST00000607212 TM4SF5O14894 197 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 POLR2DO15514 142 aaKnown RBP15.78■□□□□ 0.12
CTSA-216ENST00000607212 ZBTB24O43167 697 aaPredicted RBP15.78■□□□□ 0.12
CTSA-216ENST00000607212 TGFB1I1O43294 461 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 HSP90AA1P07900 732 aaKnown RBP15.78■□□□□ 0.12
CTSA-216ENST00000607212 CASP1P29466 404 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 GRIA2P42262 883 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 SNRPFP62306 86 aaKnown RBP15.78■□□□□ 0.12
CTSA-216ENST00000607212 GAD2Q05329 585 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 LY6G5CQ5SRR4 150 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 SH3PXD2AQ5TCZ1 1133 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 TMEM92Q6UXU6 159 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 NUDT18Q6ZVK8 323 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 EPM2AIP1Q7L775 607 aaPredicted RBP15.78■□□□□ 0.12
CTSA-216ENST00000607212 FAM35AQ86V20 835 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 RASSF3Q86WH2 238 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 C12orf40Q86WS4 652 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 SFTPA1Q8IWL2 248 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 SCFD1Q8WVM8 642 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 C7orf25Q9BPX7 421 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 NUSAP1Q9BXS6 441 aaKnown RBP15.78■□□□□ 0.12
CTSA-216ENST00000607212 MAGEF1Q9HAY2 307 aa15.78■□□□□ 0.12
CTSA-216ENST00000607212 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 SGK1O00141 431 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 GIPC1O14908 333 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 FAM163BP0C2L3 166 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 P4HA1P13674 534 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 TRIM21P19474 475 aaKnown RBP15.77■□□□□ 0.12
CTSA-216ENST00000607212 EIF2DP41214 584 aaKnown RBP15.77■□□□□ 0.12
CTSA-216ENST00000607212 MAPK8P45983 427 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 CASP4P49662 377 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 CDH8P55286 799 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 BYSLQ13895 437 aaKnown RBP15.77■□□□□ 0.12
CTSA-216ENST00000607212 GAB4Q2WGN9 574 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 PREPLQ4J6C6 727 aaPredicted RBP15.77■□□□□ 0.12
CTSA-216ENST00000607212 TRIM61Q5EBN2 209 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 EMC10Q5UCC4 262 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 RHBDF2Q6PJF5 856 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 TMEFF1Q8IYR6 380 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 CEP57L1Q8IYX8 460 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 IL17RCQ8NAC3 791 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 ZNF516Q92618 1163 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 SMARCD1Q96GM5 515 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 TNIP3Q96KP6 325 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 KCNK16Q96T55 309 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 DMAP1Q9NPF5 467 aaPredicted RBP15.77■□□□□ 0.12
CTSA-216ENST00000607212 KRT82Q9NSB4 513 aa15.77■□□□□ 0.12
CTSA-216ENST00000607212 ATXN2Q99700 1313 aaKnown RBP15.76■□□□□ 0.11
CTSA-216ENST00000607212 MYO18AQ92614 2054 aaKnown RBP15.76■□□□□ 0.11
CTSA-216ENST00000607212 E2F8A0AVK6 867 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 COCHO43405 550 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 AP1G2O75843 785 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 YEATS4O95619 227 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 OLFM2O95897 454 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 ME1P48163 572 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 SLC5A3P53794 718 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 ATXN3P54252 364 aaPredicted RBP15.76■□□□□ 0.11
CTSA-216ENST00000607212 NCOA4Q13772 614 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 HSF5Q4G112 596 aaPredicted RBP15.76■□□□□ 0.11
CTSA-216ENST00000607212 C10orf76Q5T2E6 689 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 SHC4Q6S5L8 630 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 TRMT11Q7Z4G4 463 aaKnown RBP15.76■□□□□ 0.11
CTSA-216ENST00000607212 KIAA1958Q8N8K9 716 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 SCAMP5Q8TAC9 235 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 GOLGA5Q8TBA6 731 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 OVCA2Q8WZ82 227 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 JAKMIP2Q96AA8 810 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 ELMO3Q96BJ8 720 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 CCSER2Q9H7U1 834 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 TMEM30AQ9NV96 361 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 GMIPQ9P107 970 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 CGNQ9P2M7 1197 aaKnown RBP15.76■□□□□ 0.11
CTSA-216ENST00000607212 DEC1Q9P2X7 70 aa15.76■□□□□ 0.11
CTSA-216ENST00000607212 EPG5Q9HCE0 2579 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 CEP192Q8TEP8 1941 aa15.75■□□□□ 0.11
CTSA-216ENST00000607212 STAU1O95793 577 aaKnown RBP15.75■□□□□ 0.11
CTSA-216ENST00000607212 CFIP05156 583 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms