RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-206	ENST00000602307	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.51	□□□□□ -0.41
PTPN23-206	ENST00000602307	BRD8	Q9H0E9	1235 aa		12.51	□□□□□ -0.41
PTPN23-206	ENST00000602307	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.51	□□□□□ -0.41
PTPN23-206	ENST00000602307	TMEM161A	Q9NX61	479 aa		12.51	□□□□□ -0.41
PTPN23-206	ENST00000602307	NUDT2	P50583	147 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	NFIL3	Q16649	462 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	PKN3	Q6P5Z2	889 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	ATP6V0D2	Q8N8Y2	350 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	ZBTB45	Q96K62	511 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	CYP4F12	Q9HCS2	524 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	HPS4	Q9NQG7	708 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	SNTG2	Q9NY99	539 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	PKD2L2	Q9NZM6	624 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307		A0A0A6YYK5	440 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	ENO4	A6NNW6	628 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	C5orf58	C9J3I9	102 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	FAM153B	P0C7A2	387 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	KCNA3	P22001	575 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	CDH8	P55286	799 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	ZNF177	Q13360	481 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	GRIK5	Q16478	980 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	CCNG2	Q16589	344 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	FAM153C	Q494X1	144 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	CYB5D1	Q6P9G0	228 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	CD302	Q8IX05	232 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	MCOLN2	Q8IZK6	566 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	FBXO32	Q969P5	355 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	IARS2	Q9NSE4	1012 aa	Known RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	FAM153A	Q9UHL3	310 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	CASTOR2	A6NHX0	329 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	NCF1B	A6NI72	391 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	NCF1C	A8MVU1	366 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	CFAP99	D6REC4	459 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	VWA5A	O00534	786 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	WNT10B	O00744	389 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	NCF1	P14598	390 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	CNTN2	Q02246	1040 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	BTK	Q06187	659 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	RAB42	Q8N4Z0	105 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	TLR10	Q9BXR5	811 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	FAM129A	Q9BZQ8	928 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	FAM32A	Q9Y421	112 aa	Known RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	DDX3X	O00571	662 aa	Known RBP eCLIP	12.5	□□□□□ -0.41	2e-8	■■■■□ 21.8
PTPN23-206	ENST00000602307	GPR182	O15218	404 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	DDN	O94850	711 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	VIL1	P09327	827 aa	Known RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	UBTFL6	P0CB48	400 aa	Predicted RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	ACAT1	P24752	427 aa	Known RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	RGS2	P41220	211 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	COPA	P53621	1224 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	KCNK10	P57789	538 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	EFEMP1	Q12805	493 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	POTEA	Q6S8J7	498 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	PGBD3	Q8N328	593 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	TMEM169	Q96HH4	297 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	PPP1R2P1	Q96PQ5	205 aa		12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	ADARB2	Q9NS39	739 aa	Known RBP	12.5	□□□□□ -0.41
PTPN23-206	ENST00000602307	MST1R	Q04912	1400 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	RGL2	O15211	777 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	GJB6	O95452	261 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	TH	P07101	528 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	PYGM	P11217	842 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	AKAP5	P24588	427 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	GEM	P55040	296 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	DDX39B	Q13838	428 aa	Known RBP	12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	MTFR1	Q15390	333 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	TMEM119	Q4V9L6	283 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	UNK	Q9C0B0	810 aa	Known RBP	12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	PNMA8B	Q9ULN7	279 aa	Predicted RBP	12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	RUVBL2	Q9Y230	463 aa	Known RBP	12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	SLURP2	P0DP57	97 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	RALB	P11234	206 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	DSG3	P32926	999 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	SERPINB5	P36952	375 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	TMEM154	Q6P9G4	183 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	EDEM1	Q92611	657 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	TUBGCP3	Q96CW5	907 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	TMEM106C	Q9BVX2	250 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	KIAA1683	Q9H0B3	1180 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	NOD2	Q9HC29	1040 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	PIH1D1	Q9NWS0	290 aa	Known RBP	12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	CLCA2	Q9UQC9	943 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	MRPL42	Q9Y6G3	142 aa	Known RBP	12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	CLASP2	O75122	1294 aa	Known RBP	12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	F9	P00740	461 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	SLC2A3	P11169	496 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	SLC11A2	P49281	568 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	HDAC4	P56524	1084 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	MCL1	Q07820	350 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	FBXO47	Q5MNV8	452 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	FAM83A	Q86UY5	434 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	OPTN	Q96CV9	577 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	THAP11	Q96EK4	314 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	HEATR9	A2RTY3	570 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	GLRA3	O75311	464 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	TKTL1	P51854	596 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	NDST1	P52848	882 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	PTEN	P60484	403 aa		12.49	□□□□□ -0.41
PTPN23-206	ENST00000602307	MYBPC2	Q14324	1141 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms