RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	ERLEC1	Q96DZ1	483 aa		13.11	□□□□□ -0.31
NUP62-223	ENST00000601665	CDC6	Q99741	560 aa		13.11	□□□□□ -0.31
NUP62-223	ENST00000601665	MIR1-1HG	Q9H1L0	117 aa		13.11	□□□□□ -0.31
NUP62-223	ENST00000601665	PRDM16	Q9HAZ2	1276 aa		13.11	□□□□□ -0.31
NUP62-223	ENST00000601665	CACNA2D2	Q9NY47	1150 aa		13.11	□□□□□ -0.31
NUP62-223	ENST00000601665	HELZ	P42694	1942 aa	Known RBP	13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	MYO18A	Q92614	2054 aa	Known RBP	13.1	□□□□□ -0.31
NUP62-223	ENST00000601665		A0A1B0GTW7	788 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	TISP43	B9A030	160 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	TULP3	O75386	442 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	PLCG1	P19174	1290 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	NDUFV2	P19404	249 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	BDNF	P23560	247 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	MAOB	P27338	520 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	NEK4	P51957	841 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	PSMC1	P62191	440 aa	Known RBP	13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	POU5F1	Q01860	360 aa	Known RBP	13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	IFRD2	Q12894	506 aa	Predicted RBP	13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	POSTN	Q15063	836 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	CCDC157	Q569K6	752 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	ARSH	Q5FYA8	562 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	HYI	Q5T013	277 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	ZNF605	Q86T29	641 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	OSTM1	Q86WC4	334 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	CCDC83	Q8IWF9	413 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	ZCCHC9	Q8N567	271 aa	Known RBP	13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	CSGALNACT2	Q8N6G5	542 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	TOP6BL	Q8N6T0	577 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	LRRC52	Q8N7C0	313 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	KRI1	Q8N9T8	703 aa	Known RBP	13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	RASSF8	Q8NHQ8	419 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	PIP4K2C	Q8TBX8	421 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	RHBDD1	Q8TEB9	315 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	MYLPF	Q96A32	169 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	OTUB2	Q96DC9	234 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	CRELD1	Q96HD1	420 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	CEP295NL	Q96MC4	621 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	SLITRK1	Q96PX8	696 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	PKMYT1	Q99640	499 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	SYT15	Q9BQS2	421 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	RNF38	Q9H0F5	515 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	SH3BP1	Q9Y3L3	701 aa		13.1	□□□□□ -0.31
NUP62-223	ENST00000601665	ANAPC1	Q9H1A4	1944 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	PLXNB3	Q9ULL4	1909 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	CFAP46	Q8IYW2	2715 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665		A0A087WV48	116 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	VWA3A	A6NCI4	1184 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	TK2	O00142	265 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	TRIM66	O15016	1216 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	HCRT	O43612	131 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	CBFA2T3	O75081	653 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	CHRM1	P11229	460 aa	Predicted RBP	13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	MATK	P42679	507 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	TOB1	P50616	345 aa	Predicted RBP	13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	USP46	P62068	366 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	HMGN5	P82970	282 aa	Known RBP	13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	RBP5	P82980	135 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	GTF2B	Q00403	316 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	MYO1E	Q12965	1108 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	TDRD10	Q5VZ19	366 aa	Known RBP	13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	GRAMD4	Q6IC98	578 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	IL27RA	Q6UWB1	636 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	PDCD7	Q8N8D1	485 aa	Known RBP	13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	TERB1	Q8NA31	727 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	IPO4	Q8TEX9	1081 aa	Known RBP	13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	NOC3L	Q8WTT2	800 aa	Known RBP	13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	SCFD1	Q8WVM8	642 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	CALML4	Q96GE6	196 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	FAM213A	Q9BRX8	229 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	GAREM1	Q9H706	876 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	TM7SF3	Q9NS93	570 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665	ITGA11	Q9UKX5	1188 aa		13.09	□□□□□ -0.31
NUP62-223	ENST00000601665		A0A1W2PQF6	199 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	E2F8	A0AVK6	867 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	FLRT2	O43155	660 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	ATP2C2	O75185	946 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	CILP	O75339	1184 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	ATXN1L	P0C7T5	689 aa	Known RBP	13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	CD6	P30203	668 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	ZNF131	P52739	623 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	TAF10	Q12962	218 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	SUZ12	Q15022	739 aa	Known RBP	13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	EGFLAM	Q63HQ2	1017 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	FAM171B	Q6P995	826 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	LRRC69	Q6ZNQ3	347 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	MARCH9	Q86YJ5	346 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	C1orf127	Q8N9H9	656 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	ENGASE	Q8NFI3	743 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	LLPH	Q9BRT6	129 aa	Known RBP	13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	TTLL2	Q9BWV7	592 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	NACA2	Q9H009	215 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	DNAJC17	Q9NVM6	304 aa	Known RBP	13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	GDAP2	Q9NXN4	497 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	CDH9	Q9ULB4	789 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	MYOF	Q9NZM1	2061 aa		13.08	□□□□□ -0.32
NUP62-223	ENST00000601665	TENM4	Q6N022	2769 aa		13.07	□□□□□ -0.32
NUP62-223	ENST00000601665	FAM149A	A5PLN7	773 aa		13.07	□□□□□ -0.32
NUP62-223	ENST00000601665		F8VP50	259 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms