RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 RAB41Q5JT25 222 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 VSTM1Q6UX27 236 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 CEP57Q86XR8 500 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 SLC13A5Q86YT5 568 aaPredicted RBP14.36□□□□□ -0.11
IRF3-229ENST00000601373 ZMIZ2Q8NF64 920 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 IRGQQ8WZA9 623 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 RUBCNQ92622 972 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 TTPALQ9BTX7 342 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 DDX23Q9BUQ8 820 aaKnown RBP14.36□□□□□ -0.11
IRF3-229ENST00000601373 RBM12Q9NTZ6 932 aaKnown RBP14.36□□□□□ -0.11
IRF3-229ENST00000601373 TMLHEQ9NVH6 421 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.36□□□□□ -0.11
IRF3-229ENST00000601373 SMARCAL1Q9NZC9 954 aa14.36□□□□□ -0.11
IRF3-229ENST00000601373 HHLA1C9JL84 531 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 FSCN2O14926 492 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 LRCH4O75427 683 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 ACRP10323 421 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 LAG3P18627 525 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 FLT3P36888 993 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 MAGEA11P43364 429 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 YWHAZP63104 245 aaKnown RBP14.35□□□□□ -0.11
IRF3-229ENST00000601373 FPGSQ05932 587 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 ADCY1Q08828 1119 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 BTG3Q14201 252 aaPredicted RBP14.35□□□□□ -0.11
IRF3-229ENST00000601373 USP41Q3LFD5 358 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 CCDC14Q49A88 953 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 SLC39A12Q504Y0 691 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 SPOUT1Q5T280 376 aaKnown RBP14.35□□□□□ -0.11
IRF3-229ENST00000601373 ZFYVE27Q5T4F4 411 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 KCNT2Q6UVM3 1135 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 C2orf15Q8WU43 125 aaKnown RBP14.35□□□□□ -0.11
IRF3-229ENST00000601373 IGSF21Q96ID5 467 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 PIWIL1Q96J94 861 aaKnown RBP14.35□□□□□ -0.11
IRF3-229ENST00000601373 ZNF558Q96NG5 402 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 TMEM209Q96SK2 561 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 KCNK16Q96T55 309 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 TRIM62Q9BVG3 475 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 SLITRK6Q9H5Y7 841 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 RC3H2Q9HBD1 1191 aaKnown RBP14.35□□□□□ -0.11
IRF3-229ENST00000601373 ARGLU1Q9NWB6 273 aaPredicted RBP14.35□□□□□ -0.11
IRF3-229ENST00000601373 PCDHB5Q9Y5E4 795 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 DNAH12Q6ZR08 3092 aa14.35□□□□□ -0.11
IRF3-229ENST00000601373 NT5C1B-RDH14C9J2C7 533 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 TBC1D4O60343 1298 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 DAB1O75553 588 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 GRAP2O75791 330 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 TRUB2O95900 331 aaKnown RBP14.34□□□□□ -0.11
IRF3-229ENST00000601373 EFEMP2O95967 443 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 ZBED1O96006 694 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 KRT1P04264 644 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 RHOXF2BP0C7M4 288 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 MIPP30301 263 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 NOS2P35228 1153 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 MATKP42679 507 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 DAOAP59103 153 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 DEFB103AP81534 67 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 SLC25A11Q02978 314 aaKnown RBP14.34□□□□□ -0.11
IRF3-229ENST00000601373 GPR17Q13304 367 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 SMC1AQ14683 1233 aaKnown RBP14.34□□□□□ -0.11
IRF3-229ENST00000601373 TAF5Q15542 800 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 BOLA3Q53S33 107 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 TRNP1Q6NT89 227 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 C8orf74Q6P047 294 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 STRADAQ7RTN6 431 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 CCDC50Q8IVM0 306 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 ARFGAP1Q8N6T3 406 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 CCDC26Q8TAB7 109 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 ANKRD7Q92527 254 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 TSC1Q92574 1164 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 CENPIQ92674 756 aaPredicted RBP14.34□□□□□ -0.11
IRF3-229ENST00000601373 RUNDC3BQ96NL0 473 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 TBCBQ99426 244 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 RHOXF2Q9BQY4 288 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 AP1M1Q9BXS5 423 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 ULBP1Q9BZM6 244 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 AAASQ9NRG9 546 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 HOMER3Q9NSC5 361 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 RRN3Q9NYV6 651 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 HCSTQ9UBK5 93 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 STK39Q9UEW8 545 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 STAP1Q9ULZ2 295 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 USP18Q9UMW8 372 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 EFR3BQ9Y2G0 817 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 BACE2Q9Y5Z0 518 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 TTC28Q96AY4 2481 aa14.34□□□□□ -0.11
IRF3-229ENST00000601373 TRIM66O15016 1216 aa14.33□□□□□ -0.12
IRF3-229ENST00000601373 PRPSAP2O60256 369 aa14.33□□□□□ -0.12
IRF3-229ENST00000601373 PTPN7P35236 360 aa14.33□□□□□ -0.12
IRF3-229ENST00000601373 GJC1P36383 396 aa14.33□□□□□ -0.12
IRF3-229ENST00000601373 GRIK1P39086 918 aa14.33□□□□□ -0.12
IRF3-229ENST00000601373 CACNA2D1P54289 1103 aa14.33□□□□□ -0.12
IRF3-229ENST00000601373 SHHQ15465 462 aa14.33□□□□□ -0.12
IRF3-229ENST00000601373 DAB2IPQ5VWQ8 1189 aa14.33□□□□□ -0.12
IRF3-229ENST00000601373 PM20D1Q6GTS8 502 aa14.33□□□□□ -0.12
IRF3-229ENST00000601373 PSRC1Q6PGN9 363 aaPredicted RBP14.33□□□□□ -0.12
IRF3-229ENST00000601373 BEND5Q7L4P6 421 aa14.33□□□□□ -0.12
IRF3-229ENST00000601373 MAATS1Q7Z4T9 603 aa14.33□□□□□ -0.12
IRF3-229ENST00000601373 RNF168Q8IYW5 571 aaPredicted RBP14.33□□□□□ -0.12
IRF3-229ENST00000601373 SLC39A11Q8N1S5 342 aa14.33□□□□□ -0.12
IRF3-229ENST00000601373 SPPL2BQ8TCT7 592 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms