RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 C5orf67F2Z3F1 127 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 PDGFRAP16234 1089 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 FLT3P36888 993 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 TAF5Q15542 800 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 FAM109BQ6ICB4 259 aaPredicted RBP23.68■■□□□ 1.38
IRF3-228ENST00000601291 TMC7Q7Z402 723 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 RXFP2Q8WXD0 754 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 AUTS2Q8WXX7 1259 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 GDF15Q99988 308 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 C17orf80Q9BSJ5 609 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 CNPY3Q9BT09 278 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 C11orf84Q9BUA3 381 aaPredicted RBP23.68■■□□□ 1.38
IRF3-228ENST00000601291 HSFX1Q9UBD0 423 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 CDC23Q9UJX2 597 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 SLC27A5Q9Y2P5 690 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 MRFAP1Q9Y605 127 aa23.68■■□□□ 1.38
IRF3-228ENST00000601291 PATJQ8NI35 1801 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 DPYSL4O14531 572 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 TNFRSF10BO14763 440 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 DAB1O75553 588 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 VNN2O95498 520 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 RB1P06400 928 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 CA3P07451 260 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 USP17L7P0C7H9 530 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 MYOGP15173 224 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 CTNNA2P26232 953 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 SDC4P31431 198 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 TUFMP49411 452 aaKnown RBP23.67■■□□□ 1.38
IRF3-228ENST00000601291 YWHAZP63104 245 aaKnown RBP23.67■■□□□ 1.38
IRF3-228ENST00000601291 UBE3AQ05086 875 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 DUSP4Q13115 394 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 RAB33AQ14088 237 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 DDR2Q16832 855 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 NUP93Q8N1F7 819 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 TTC9BQ8N6N2 239 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 KHSRPQ92945 711 aaKnown RBP eCLIP23.67■■□□□ 1.38
IRF3-228ENST00000601291 CD101Q93033 1021 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 PSMB7Q99436 277 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 TRIM62Q9BVG3 475 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 RXFP1Q9HBX9 757 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.67■■□□□ 1.38
IRF3-228ENST00000601291 USP3Q9Y6I4 520 aa23.67■■□□□ 1.38
IRF3-228ENST00000601291 KCNK3O14649 394 aa23.66■■□□□ 1.38
IRF3-228ENST00000601291 RNF8O76064 485 aa23.66■■□□□ 1.38
IRF3-228ENST00000601291 ABLIM3O94929 683 aa23.66■■□□□ 1.38
IRF3-228ENST00000601291 CTNNA1P35221 906 aaKnown RBP23.66■■□□□ 1.38
IRF3-228ENST00000601291 SSR1P43307 286 aaKnown RBP23.66■■□□□ 1.38
IRF3-228ENST00000601291 PM20D1Q6GTS8 502 aa23.66■■□□□ 1.38
IRF3-228ENST00000601291 SPATA17Q96L03 361 aa23.66■■□□□ 1.38
IRF3-228ENST00000601291 CEP295NLQ96MC4 621 aa23.66■■□□□ 1.38
IRF3-228ENST00000601291 FBXO44Q9H4M3 255 aa23.66■■□□□ 1.38
IRF3-228ENST00000601291 L2HGDHQ9H9P8 463 aa23.66■■□□□ 1.38
IRF3-228ENST00000601291 POPDC2Q9HBU9 364 aa23.66■■□□□ 1.38
IRF3-228ENST00000601291 ALG13Q9NP73 1137 aaKnown RBP23.66■■□□□ 1.38
IRF3-228ENST00000601291 ENTPD7Q9NQZ7 604 aa23.66■■□□□ 1.38
IRF3-228ENST00000601291 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.66■■□□□ 1.38
IRF3-228ENST00000601291 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.65■■□□□ 1.38
IRF3-228ENST00000601291 LILRB3O75022 631 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 ATF2P15336 505 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 GPR15P49685 360 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 IFRD2Q12894 506 aaPredicted RBP23.65■■□□□ 1.38
IRF3-228ENST00000601291 CC2D1AQ6P1N0 951 aaPredicted RBP23.65■■□□□ 1.38
IRF3-228ENST00000601291 RHOT1Q8IXI2 618 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 PBKQ96KB5 322 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 TGS1Q96RS0 853 aaKnown RBP23.65■■□□□ 1.38
IRF3-228ENST00000601291 NCAPGQ9BPX3 1015 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 TCF25Q9BQ70 676 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 CRISPLD1Q9H336 500 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 MAFFQ9ULX9 164 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 CES2O00748 559 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 TEX28O15482 410 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 DDX3YO15523 660 aaKnown RBP23.65■■□□□ 1.38
IRF3-228ENST00000601291 PSTPIP1O43586 416 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 SRGAP2O75044 1071 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 RTN3O95197 1032 aaPredicted RBP23.65■■□□□ 1.38
IRF3-228ENST00000601291 CXCL14O95715 111 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 CXCR5P32302 372 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 MATKP42679 507 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 PTPN9P43378 593 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 WHAMMP3Q1A5X7 153 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 SDHAF4Q5VUM1 108 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 DENND5BQ6ZUT9 1274 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 CPNE8Q86YQ8 564 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 SCAMP5Q8TAC9 235 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 NDRG1Q92597 394 aaKnown RBP23.65■■□□□ 1.38
IRF3-228ENST00000601291 CFAP57Q96MR6 1250 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 MTUS1Q9ULD2 1270 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 STAP1Q9ULZ2 295 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 PCDHA3Q9Y5H8 950 aa23.65■■□□□ 1.38
IRF3-228ENST00000601291 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.64■■□□□ 1.37
IRF3-228ENST00000601291 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.64■■□□□ 1.37
IRF3-228ENST00000601291 YJEFN3A6XGL0 299 aa23.64■■□□□ 1.37
IRF3-228ENST00000601291 E7ENQ6 273 aa23.64■■□□□ 1.37
IRF3-228ENST00000601291 CAPN9O14815 690 aa23.64■■□□□ 1.37
IRF3-228ENST00000601291 LTFP02788 710 aa23.64■■□□□ 1.37
IRF3-228ENST00000601291 ELF1P32519 619 aa23.64■■□□□ 1.37
IRF3-228ENST00000601291 SMC1AQ14683 1233 aaKnown RBP23.64■■□□□ 1.37
IRF3-228ENST00000601291 HADHQ16836 314 aaKnown RBP23.64■■□□□ 1.37
IRF3-228ENST00000601291 CCDC14Q49A88 953 aa23.64■■□□□ 1.37
IRF3-228ENST00000601291 TRNP1Q6NT89 227 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms