RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TMEM92Q6UXU6 159 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 FAM35AQ86V20 835 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 SLC9A9Q8IVB4 645 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 FUKQ8N0W3 1084 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 PHTF2Q8N3S3 785 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 CCDC33Q8N5R6 958 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 ZMIZ2Q8NF64 920 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 OLIG1Q8TAK6 271 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 CNOT6LQ96LI5 555 aaKnown RBP19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 LSM14BQ9BX40 385 aaKnown RBP19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 KCTD10Q9H3F6 313 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 FAM13BQ9NYF5 915 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 SERTAD1Q9UHV2 236 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 KIAA1549LQ6ZVL6 1849 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 E2F8A0AVK6 867 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 PHACTR2O75167 634 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 MBL2P11226 248 aaPredicted RBP19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 PDIA4P13667 645 aaKnown RBP19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 KIR2DL1P43626 348 aaPredicted RBP19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 ME1P48163 572 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 PGFP49763 221 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 DLG4P78352 724 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 IFRD2Q12894 506 aaPredicted RBP19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 NCOA4Q13772 614 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 ZNF699Q32M78 642 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 EMC10Q5UCC4 262 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 PMS2CLQ68D20 193 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 ATL3Q6DD88 541 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 IL17RCQ8NAC3 791 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 PDZD8Q8NEN9 1154 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 MDGA1Q8NFP4 955 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 GOLGA5Q8TBA6 731 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 FBXO32Q969P5 355 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 WBP2Q969T9 261 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 PAGE5Q96GU1 130 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 PNKPQ96T60 521 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 DUSP9Q99956 384 aaKnown RBP19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 TPSD1Q9BZJ3 242 aa19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 HELZP42694 1942 aaKnown RBP19.1■□□□□ 0.65
CHMP2A-208ENST00000601220 MYO16Q9Y6X6 1858 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 ZFHX4Q86UP3 3567 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 RALGAPA1Q6GYQ0 2036 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 KRT37O76014 449 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 BEST1O76090 585 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 KAT7O95251 611 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 CAVIN2O95810 425 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 BCKDHBP21953 392 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 PMLP29590 882 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 SLC5A3P53794 718 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 CREB5Q02930 508 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 BIRC3Q13489 604 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 USP39Q53GS9 565 aaKnown RBP19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 ZNF667Q5HYK9 610 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 C1orf220Q5T0J3 134 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 HECTD3Q5T447 861 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 ANO7Q6IWH7 933 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 DDX42Q86XP3 938 aaKnown RBP eCLIP19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 CRYBG2Q8N1P7 616 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 ALLCQ8N6M5 410 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 SMOQ99835 787 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 CCSER2Q9H7U1 834 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 COMMD8Q9NX08 183 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 TBC1D14Q9P2M4 693 aa19.09■□□□□ 0.65
CHMP2A-208ENST00000601220 SPAG17Q6Q759 2223 aa19.08■□□□□ 0.65
CHMP2A-208ENST00000601220 SGK1O00141 431 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 GREM1O60565 184 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 ADAM23O75077 832 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 ADH1CP00326 375 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 ADH5P11766 374 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 TUBP50607 506 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 DNM1Q05193 864 aaKnown RBP19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 ZACNQ401N2 412 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 KMT5BQ4FZB7 885 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 LY6G5CQ5SRR4 150 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 ACOT1Q86TX2 421 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 ETFBKMTQ8IXQ9 262 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 OTUB2Q96DC9 234 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 TNIP3Q96KP6 325 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 CSNK1G1Q9HCP0 422 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 DMAP1Q9NPF5 467 aaPredicted RBP19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 GMIPQ9P107 970 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 HMGXB4Q9UGU5 601 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 HCN2Q9UL51 889 aa19.08■□□□□ 0.64
CHMP2A-208ENST00000601220 CNOT1A5YKK6 2376 aaKnown RBP19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 PDXKO00764 312 aa19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 KCNK5O95279 499 aa19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 KLF8O95600 359 aaPredicted RBP19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 GBP1P32455 592 aa19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 GRIA2P42262 883 aa19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 TNFRSF4P43489 277 aa19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 SGSM1Q2NKQ1 1148 aa19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 HSF5Q4G112 596 aaPredicted RBP19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 RNF43Q68DV7 783 aa19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 SCARA5Q6ZMJ2 495 aa19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 C11orf74Q86VG3 221 aa19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 CEP57L1Q8IYX8 460 aa19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 TXNDC5Q8NBS9 432 aaKnown RBP19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 SMARCD1Q96GM5 515 aa19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 MED10Q9BTT4 135 aa19.07■□□□□ 0.64
CHMP2A-208ENST00000601220 CHD8Q9HCK8 2581 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms