RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 IBSPP21815 317 aaPredicted RBP15.13■□□□□ 0.01
VRK3-217ENST00000599538 LRPAP1P30533 357 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 SDC4P31431 198 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 PNPLA4P41247 253 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 CCT5P48643 541 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 TNFAIP8L3Q5GJ75 292 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 ZCCHC9Q8N567 271 aaKnown RBP15.13■□□□□ 0.01
VRK3-217ENST00000599538 ARFGAP2Q8N6H7 521 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 BBOF1Q8ND07 529 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 C3orf58Q8NDZ4 430 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 STK32AQ8WU08 396 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 LRRN4Q8WUT4 740 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 PAAF1Q9BRP4 392 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 SNRNP25Q9BV90 132 aaKnown RBP15.13■□□□□ 0.01
VRK3-217ENST00000599538 PCDH9Q9HC56 1237 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 PPANQ9NQ55 473 aaKnown RBP15.13■□□□□ 0.01
VRK3-217ENST00000599538 CALCOCO1Q9P1Z2 691 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 TPX2Q9ULW0 747 aaKnown RBP15.13■□□□□ 0.01
VRK3-217ENST00000599538 GOLGA8MH3BSY2 632 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 APOC4-APOC2K7ER74 178 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 M0QZ92 97 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 CYB561D2O14569 222 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 SEPT4O43236 478 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 APOC2P02655 101 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 CREB1P16220 341 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 BCAT1P54687 386 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 MGAT3Q09327 533 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 MTM1Q13496 603 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 KCNA10Q16322 511 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 C6orf118Q5T5N4 469 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 ANKRD22Q5VYY1 191 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 PAQR9Q6ZVX9 377 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 ZC3H18Q86VM9 953 aaKnown RBP15.13■□□□□ 0.01
VRK3-217ENST00000599538 FUKQ8N0W3 1084 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 B3GALNT2Q8NCR0 500 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 SPATA18Q8TC71 538 aa15.13■□□□□ 0.01
VRK3-217ENST00000599538 TIMM13Q9Y5L4 95 aaPredicted RBP15.13■□□□□ 0.01
VRK3-217ENST00000599538 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 MGEA5O60502 916 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 KPNA6O60684 536 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 IVLP07476 585 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 RBP3P10745 1247 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 RPL22P35268 128 aaKnown RBP15.12■□□□□ 0.01
VRK3-217ENST00000599538 MAGEA4P43358 317 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 CLCNKBP51801 687 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 EIF3EP60228 445 aaKnown RBP15.12■□□□□ 0.01
VRK3-217ENST00000599538 C1orf228Q6PIY5 440 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 AGMOQ6ZNB7 445 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 FAM71DQ8N9W8 422 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 C11orf84Q9BUA3 381 aaPredicted RBP15.12■□□□□ 0.01
VRK3-217ENST00000599538 TSPYL2Q9H2G4 693 aaPredicted RBP15.12■□□□□ 0.01
VRK3-217ENST00000599538 RSAD1Q9HA92 442 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 SAYSD1Q9NPB0 183 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 XPNPEP3Q9NQH7 507 aa15.12■□□□□ 0.01
VRK3-217ENST00000599538 TCRBV7S3A2A0A539 114 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 WARSP23381 471 aaKnown RBP15.11■□□□□ 0.01
VRK3-217ENST00000599538 RPL34P49207 117 aaKnown RBP15.11■□□□□ 0.01
VRK3-217ENST00000599538 PIGZQ86VD9 579 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 EXOC3L1Q86VI1 746 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 CYP4X1Q8N118 509 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 PQLC3Q8N755 202 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 TTC13Q8NBP0 860 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 CCHCR1Q8TD31 782 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 PRCCQ92733 491 aaPredicted RBP15.11■□□□□ 0.01
VRK3-217ENST00000599538 RNF157Q96PX1 679 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 TSPYL1Q9H0U9 437 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 EPN3Q9H201 632 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 PCDH18Q9HCL0 1135 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 RNF186Q9NXI6 227 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
VRK3-217ENST00000599538 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.11■□□□□ 0.01
VRK3-217ENST00000599538 TMEM88BA6NKF7 163 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 CD52P31358 61 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 THPOP40225 353 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 CTCFP49711 727 aaPredicted RBP15.11■□□□□ 0.01
VRK3-217ENST00000599538 NDUFV1P49821 464 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 SCNN1GP51170 649 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 PITX1P78337 314 aaPredicted RBP15.11■□□□□ 0.01
VRK3-217ENST00000599538 KRT81Q14533 505 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 CAPN12Q6ZSI9 719 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 SLC26A9Q7LBE3 791 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 RELL1Q8IUW5 271 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 PLD5Q8N7P1 536 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 PCDH19Q8TAB3 1148 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 CPT1BQ92523 772 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 SELENOSQ9BQE4 189 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 FAM107BQ9H098 131 aa15.11■□□□□ 0.01
VRK3-217ENST00000599538 ARL5CA6NH57 179 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 CASTOR2A6NHX0 329 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 A6NNZ2 444 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 ANKRD65E5RJM6 399 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 E7EVH7 732 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 NDUFAB1O14561 156 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 GABRDO14764 452 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 AOC2O75106 756 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 AGTP01019 485 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 GHRP10912 638 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 CHN1P15882 459 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 PTPN1P18031 435 aaKnown RBP15.1■□□□□ 0.01
VRK3-217ENST00000599538 MMP13P45452 471 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms