RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 TMEM150AQ86TG1 271 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 SCUBE3Q8IX30 993 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 TXNDC5Q8NBS9 432 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 CCDC26Q8TAB7 109 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 DHTKD1Q96HY7 919 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 MED15Q96RN5 788 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 TCHPQ9BT92 498 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 OXCT2Q9BYC2 517 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 KCTD10Q9H3F6 313 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 TRPC7Q9HCX4 862 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 DKK4Q9UBT3 224 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 MAGED2Q9UNF1 606 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 MAPK8IP1Q9UQF2 711 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 PHLPP2Q6ZVD8 1323 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 CEP192Q8TEP8 1941 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 PLXND1Q9Y4D7 1925 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 FAM149AA5PLN7 773 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 TRABD2BA6NFA1 517 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 K7ERI5 159 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 SGK1O00141 431 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 AP5Z1O43299 807 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 KIF20AO95235 890 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 PIGRP01833 764 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 SYPP08247 313 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 ERCC5P28715 1186 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 TIE1P35590 1138 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 MYBPC2Q14324 1141 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 KNOP1Q1ED39 458 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 ANO6Q4KMQ2 910 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 ZCWPW2Q504Y3 356 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 SFTPA1Q8IWL2 248 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 EFCAB13Q8IY85 973 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 OR10T2Q8NGX3 314 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 OSCP1Q8WVF1 389 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 MRPS31Q92665 395 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 ACCSQ96QU6 501 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 ACO2Q99798 780 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 BPIFA3Q9BQP9 254 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 TMEM206Q9H813 350 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 DACH1Q9UI36 760 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 DENND4CQ5VZ89 1909 aa14.86□□□□□ -0.03
SHKBP1-218ENST00000598907 MUC22E2RYF6 1773 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 ARHGAP6O43182 974 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 TGFB1I1O43294 461 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 OPRD1P41143 372 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 TUFMP49411 452 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 GUCY2FP51841 1108 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 ZNF33AQ06730 810 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 STIM1Q13586 685 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 EML3Q32P44 896 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 PLEKHG6Q3KR16 790 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 TMPRSS7Q7RTY8 843 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 RABEPKQ7Z6M1 372 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 SETD7Q8WTS6 366 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 TMEM174Q8WUU8 243 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 TARS2Q9BW92 718 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 TSPY26PQ9H489 355 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 ABI2Q9NYB9 513 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 ZMYM5Q9UJ78 669 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 TRAF3IP3Q9Y228 551 aa14.85□□□□□ -0.03
SHKBP1-218ENST00000598907 HELZP42694 1942 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 PDXKO00764 312 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 PSMA7O14818 248 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 GJB3O75712 270 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 F11P03951 625 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 CKMP06732 381 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 MCF2P10911 925 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 DDX6P26196 483 aaKnown RBP eCLIP14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 PMS1P54277 932 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 SNRPFP62306 86 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 USP4Q13107 963 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 NR1H3Q13133 447 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 SLC14A1Q13336 389 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 BYSLQ13895 437 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 ZNF77Q15935 545 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 NFIL3Q16649 462 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 CCDC157Q569K6 752 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 SPDYCQ5MJ68 293 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 NELFCDQ8IXH7 590 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 NELFBQ8WX92 580 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 HSPA12BQ96MM6 686 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 FCRL3Q96P31 734 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 MRPL4Q9BYD3 311 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 IKZF4Q9H2S9 585 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 PTPRHQ9HD43 1115 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 RWDD2AQ9UIY3 292 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 PCOLCE2Q9UKZ9 415 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 EXOC7Q9UPT5 735 aa14.84□□□□□ -0.03
SHKBP1-218ENST00000598907 PPEF2O14830 753 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 CXCL8P10145 99 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 ODC1P11926 461 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 GPR15P49685 360 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 STRN3Q13033 797 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 PAK1Q13153 545 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 ZNF268Q14587 947 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 IQCB1Q15051 598 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 SLC10A6Q3KNW5 377 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 ANKRD40Q6AI12 368 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 TTI2Q6NXR4 508 aa14.83□□□□□ -0.04
SHKBP1-218ENST00000598907 SLC39A4Q6P5W5 647 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms