RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 CD19P15391 556 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 NPR3P17342 541 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 SLC9A1P19634 815 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 TBXAS1P24557 533 aaPredicted RBP12.76□□□□□ -0.37
ZNF548-209ENST00000598895 YWHAQP27348 245 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 SLC5A3P53794 718 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 GJB7Q6PEY0 223 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 CLEC20AQ6ZU45 233 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 GPRIN1Q7Z2K8 1008 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 BMP8AQ7Z5Y6 402 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 MON1AQ86VX9 555 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 MFSD6LQ8IWD5 586 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 ARL14EPQ8N8R7 260 aaPredicted RBP12.76□□□□□ -0.37
ZNF548-209ENST00000598895 ENOX1Q8TC92 643 aaKnown RBP12.76□□□□□ -0.37
ZNF548-209ENST00000598895 USP13Q92995 863 aaPredicted RBP12.76□□□□□ -0.37
ZNF548-209ENST00000598895 FBXO32Q969P5 355 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 HNRNPABQ99729 332 aaKnown RBP12.76□□□□□ -0.37
ZNF548-209ENST00000598895 DNAI2Q9GZS0 605 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 TRPV4Q9HBA0 871 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 HEBP1Q9NRV9 189 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 TRPM5Q9NZQ8 1165 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 CHORDC1Q9UHD1 332 aaPredicted RBP12.76□□□□□ -0.37
ZNF548-209ENST00000598895 DNAI1Q9UI46 699 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 COL4A2P08572 1712 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 TRAV19A0A0A6YYK7 116 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 KCNJ18B7U540 433 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 PES1O00541 588 aaKnown RBP12.75□□□□□ -0.37
ZNF548-209ENST00000598895 TNFRSF10BO14763 440 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 ZNF263O14978 683 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 PMM2O15305 246 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 ATP8B1O43520 1251 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 RTN3O95197 1032 aaPredicted RBP12.75□□□□□ -0.37
ZNF548-209ENST00000598895 CD72P21854 359 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 DDX6P26196 483 aaKnown RBP eCLIP12.75□□□□□ -0.37
ZNF548-209ENST00000598895 HELZP42694 1942 aaKnown RBP12.75□□□□□ -0.37
ZNF548-209ENST00000598895 YWHAEP62258 255 aaKnown RBP12.75□□□□□ -0.37
ZNF548-209ENST00000598895 KCNJ12Q14500 433 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 ELF2Q15723 593 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 GOLGA7BQ2TAP0 167 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 SLC44A4Q53GD3 710 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 CWF19L1Q69YN2 538 aaKnown RBP12.75□□□□□ -0.37
ZNF548-209ENST00000598895 PHLDB3Q6NSJ2 640 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 TMEM270Q6UE05 265 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 SYT10Q6XYQ8 523 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 FAM114A1Q8IWE2 563 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 TTC39CQ8N584 583 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 CELF5Q8N6W0 485 aaKnown RBP12.75□□□□□ -0.37
ZNF548-209ENST00000598895 UBR7Q8N806 425 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 MNS1Q8NEH6 495 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 RIN3Q8TB24 985 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 BPIFB1Q8TDL5 484 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 DEPDC1BQ8WUY9 529 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 FAXDC2Q96IV6 333 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 SLITRK1Q96PX8 696 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 TTLL2Q9BWV7 592 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 TBC1D17Q9HA65 648 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 CSNK1G1Q9HCP0 422 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 FAM53CQ9NYF3 392 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 EHD2Q9NZN4 543 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 GMIPQ9P107 970 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 KIF26AQ9ULI4 1882 aaPredicted RBP12.75□□□□□ -0.37
ZNF548-209ENST00000598895 NFE2L3Q9Y4A8 694 aa12.75□□□□□ -0.37
ZNF548-209ENST00000598895 ZNF840PA6NDX5 716 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 HHLA1C9JL84 531 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 RNF225M0QZC1 329 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-209ENST00000598895 PI15O43692 258 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 USP17L7P0C7H9 530 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 H2AFXP16104 143 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-209ENST00000598895 HDCP19113 662 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 ACO1P21399 889 aaKnown RBP12.74□□□□□ -0.37
ZNF548-209ENST00000598895 PFKPQ01813 784 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 MLF2Q15773 248 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-209ENST00000598895 MAN2A1Q16706 1144 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 SGO2Q562F6 1265 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 TRIM65Q6PJ69 517 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 GBP6Q6ZN66 633 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 TPRG1Q6ZUI0 275 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 TMEM105Q8N8V8 129 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 RBBP8NLQ8NC74 664 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-209ENST00000598895 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 UBXN4Q92575 508 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 E2F7Q96AV8 911 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 CEP295NLQ96MC4 621 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 KREMEN1Q96MU8 473 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 TUBGCP2Q9BSJ2 902 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 FOXQ1Q9C009 403 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 UBE2TQ9NPD8 197 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-209ENST00000598895 TDP1Q9NUW8 608 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 SMPD4Q9NXE4 827 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 TAB2Q9NYJ8 693 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 TSPAN16Q9UKR8 245 aa12.74□□□□□ -0.37
ZNF548-209ENST00000598895 EFCAB8A8MWE9 144 aa12.73□□□□□ -0.37
ZNF548-209ENST00000598895 TULP2O00295 520 aa12.73□□□□□ -0.37
ZNF548-209ENST00000598895 SCAMP3O14828 347 aaKnown RBP12.73□□□□□ -0.37
ZNF548-209ENST00000598895 CYP26A1O43174 497 aa12.73□□□□□ -0.37
ZNF548-209ENST00000598895 KRT5P13647 590 aa12.73□□□□□ -0.37
ZNF548-209ENST00000598895 CDK11BP21127 795 aaKnown RBP12.73□□□□□ -0.37
ZNF548-209ENST00000598895 BRD2P25440 801 aaKnown RBP12.73□□□□□ -0.37
ZNF548-209ENST00000598895 AVPR2P30518 371 aa12.73□□□□□ -0.37
ZNF548-209ENST00000598895 SOX9P48436 509 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms