RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 EP300Q09472 2414 aaPredicted RBP24.37■■□□□ 1.49
SSBP4-205ENST00000598159 BEST1O76090 585 aa24.37■■□□□ 1.49
SSBP4-205ENST00000598159 EGFP01133 1207 aa24.37■■□□□ 1.49
SSBP4-205ENST00000598159 MBL2P11226 248 aaPredicted RBP24.37■■□□□ 1.49
SSBP4-205ENST00000598159 MAP3K7CLP57077 242 aa24.37■■□□□ 1.49
SSBP4-205ENST00000598159 ORC1Q13415 861 aa24.37■■□□□ 1.49
SSBP4-205ENST00000598159 ANKRD40Q6AI12 368 aa24.37■■□□□ 1.49
SSBP4-205ENST00000598159 LONP2Q86WA8 852 aa24.37■■□□□ 1.49
SSBP4-205ENST00000598159 FBXL13Q8NEE6 735 aa24.37■■□□□ 1.49
SSBP4-205ENST00000598159 FAM49BQ9NUQ9 324 aa24.37■■□□□ 1.49
SSBP4-205ENST00000598159 RAB20Q9NX57 234 aa24.37■■□□□ 1.49
SSBP4-205ENST00000598159 NCDNQ9UBB6 729 aa24.37■■□□□ 1.49
SSBP4-205ENST00000598159 SMG5Q9UPR3 1016 aaKnown RBP24.37■■□□□ 1.49
SSBP4-205ENST00000598159 ATG2BQ96BY7 2078 aa24.37■■□□□ 1.49
SSBP4-205ENST00000598159 CHURC1-FNTBB4DL54 471 aa24.36■■□□□ 1.49
SSBP4-205ENST00000598159 CILPO75339 1184 aa24.36■■□□□ 1.49
SSBP4-205ENST00000598159 ZDHHC11BP0C7U3 371 aa24.36■■□□□ 1.49
SSBP4-205ENST00000598159 FAM200BP0CF97 657 aa24.36■■□□□ 1.49
SSBP4-205ENST00000598159 TUBP50607 506 aa24.36■■□□□ 1.49
SSBP4-205ENST00000598159 DCLK2Q8N568 766 aa24.36■■□□□ 1.49
SSBP4-205ENST00000598159 TTC39CQ8N584 583 aa24.36■■□□□ 1.49
SSBP4-205ENST00000598159 GPR161Q8N6U8 529 aaKnown RBP24.36■■□□□ 1.49
SSBP4-205ENST00000598159 CCDC26Q8TAB7 109 aa24.36■■□□□ 1.49
SSBP4-205ENST00000598159 SMPD4Q9NXE4 827 aa24.36■■□□□ 1.49
SSBP4-205ENST00000598159 RAB23Q9ULC3 237 aa24.36■■□□□ 1.49
SSBP4-205ENST00000598159 SLC16A3O15427 465 aaKnown RBP24.35■■□□□ 1.49
SSBP4-205ENST00000598159 COCHO43405 550 aa24.35■■□□□ 1.49
SSBP4-205ENST00000598159 FNTBP49356 437 aa24.35■■□□□ 1.49
SSBP4-205ENST00000598159 MXI1P50539 228 aa24.35■■□□□ 1.49
SSBP4-205ENST00000598159 LRRC63Q05C16 580 aa24.35■■□□□ 1.49
SSBP4-205ENST00000598159 FILIP1Q7Z7B0 1213 aa24.35■■□□□ 1.49
SSBP4-205ENST00000598159 ZC3H3Q8IXZ2 948 aaKnown RBP24.35■■□□□ 1.49
SSBP4-205ENST00000598159 KIAA2013Q8IYS2 634 aa24.35■■□□□ 1.49
SSBP4-205ENST00000598159 WHAMMQ8TF30 809 aa24.35■■□□□ 1.49
SSBP4-205ENST00000598159 SEMA4DQ92854 862 aa24.35■■□□□ 1.49
SSBP4-205ENST00000598159 ERCC4Q92889 916 aaPredicted RBP24.35■■□□□ 1.49
SSBP4-205ENST00000598159 TWNKQ96RR1 684 aa24.35■■□□□ 1.49
SSBP4-205ENST00000598159 FAM124BQ9H5Z6 455 aaPredicted RBP24.35■■□□□ 1.49
SSBP4-205ENST00000598159 C2orf42Q9NWW7 574 aa24.35■■□□□ 1.49
SSBP4-205ENST00000598159 CFAP97Q9P2B7 532 aa24.35■■□□□ 1.49
SSBP4-205ENST00000598159 TBC1D14Q9P2M4 693 aa24.35■■□□□ 1.49
SSBP4-205ENST00000598159 CFAP54Q96N23 3096 aa24.34■■□□□ 1.49
SSBP4-205ENST00000598159 OTOGLQ3ZCN5 2332 aa24.34■■□□□ 1.49
SSBP4-205ENST00000598159 E2F8A0AVK6 867 aa24.34■■□□□ 1.49
SSBP4-205ENST00000598159 CD58P19256 250 aa24.34■■□□□ 1.49
SSBP4-205ENST00000598159 ADORA2BP29275 332 aa24.34■■□□□ 1.49
SSBP4-205ENST00000598159 PPP1R2P41236 205 aa24.34■■□□□ 1.49
SSBP4-205ENST00000598159 STIM1Q13586 685 aa24.34■■□□□ 1.49
SSBP4-205ENST00000598159 PNPLA8Q9NP80 782 aa24.34■■□□□ 1.49
SSBP4-205ENST00000598159 TLR8Q9NR97 1041 aaKnown RBP24.34■■□□□ 1.49
SSBP4-205ENST00000598159 SLC8A2Q9UPR5 921 aa24.34■■□□□ 1.49
SSBP4-205ENST00000598159 CCDC163A0A0D9SF12 145 aa24.33■■□□□ 1.49
SSBP4-205ENST00000598159 HRO43593 1189 aa24.33■■□□□ 1.49
SSBP4-205ENST00000598159 RNF40O75150 1001 aa24.33■■□□□ 1.49
SSBP4-205ENST00000598159 DMWDQ09019 674 aa24.33■■□□□ 1.49
SSBP4-205ENST00000598159 TCERG1LQ5VWI1 586 aa24.33■■□□□ 1.49
SSBP4-205ENST00000598159 PKN3Q6P5Z2 889 aa24.33■■□□□ 1.49
SSBP4-205ENST00000598159 CLEC20AQ6ZU45 233 aa24.33■■□□□ 1.49
SSBP4-205ENST00000598159 WDR5BQ86VZ2 330 aa24.33■■□□□ 1.49
SSBP4-205ENST00000598159 OTUB2Q96DC9 234 aa24.33■■□□□ 1.49
SSBP4-205ENST00000598159 DHTKD1Q96HY7 919 aaPredicted RBP24.33■■□□□ 1.49
SSBP4-205ENST00000598159 HEXIM2Q96MH2 286 aaKnown RBP24.33■■□□□ 1.49
SSBP4-205ENST00000598159 GMIPQ9P107 970 aa24.33■■□□□ 1.49
SSBP4-205ENST00000598159 GVINP1Q7Z2Y8 2422 aa24.33■■□□□ 1.48
SSBP4-205ENST00000598159 ID4P47928 161 aa24.32■■□□□ 1.48
SSBP4-205ENST00000598159 PMS1P54277 932 aaKnown RBP24.32■■□□□ 1.48
SSBP4-205ENST00000598159 SIM2Q14190 667 aaPredicted RBP24.32■■□□□ 1.48
SSBP4-205ENST00000598159 DHCR24Q15392 516 aa24.32■■□□□ 1.48
SSBP4-205ENST00000598159 NAIF1Q69YI7 327 aaPredicted RBP24.32■■□□□ 1.48
SSBP4-205ENST00000598159 HEATR6Q6AI08 1181 aaKnown RBP24.32■■□□□ 1.48
SSBP4-205ENST00000598159 CAMKK1Q8N5S9 505 aa24.32■■□□□ 1.48
SSBP4-205ENST00000598159 CCSER2Q9H7U1 834 aa24.32■■□□□ 1.48
SSBP4-205ENST00000598159 GMEB2Q9UKD1 530 aa24.32■■□□□ 1.48
SSBP4-205ENST00000598159 SCML2Q9UQR0 700 aa24.32■■□□□ 1.48
SSBP4-205ENST00000598159 COQ4Q9Y3A0 265 aa24.32■■□□□ 1.48
SSBP4-205ENST00000598159 HHLA1C9JL84 531 aa24.31■■□□□ 1.48
SSBP4-205ENST00000598159 PSMA7O14818 248 aa24.31■■□□□ 1.48
SSBP4-205ENST00000598159 OPRD1P41143 372 aa24.31■■□□□ 1.48
SSBP4-205ENST00000598159 LAIR1Q6GTX8 287 aa24.31■■□□□ 1.48
SSBP4-205ENST00000598159 TATDN2Q93075 761 aa24.31■■□□□ 1.48
SSBP4-205ENST00000598159 ZFRQ96KR1 1074 aaKnown RBP24.31■■□□□ 1.48
SSBP4-205ENST00000598159 DUSP9Q99956 384 aaKnown RBP24.31■■□□□ 1.48
SSBP4-205ENST00000598159 DUSP16Q9BY84 665 aa24.31■■□□□ 1.48
SSBP4-205ENST00000598159 NACA2Q9H009 215 aa24.31■■□□□ 1.48
SSBP4-205ENST00000598159 METTL14Q9HCE5 456 aaKnown RBP24.31■■□□□ 1.48
SSBP4-205ENST00000598159 ARMCX3Q9UH62 379 aaPredicted RBP24.31■■□□□ 1.48
SSBP4-205ENST00000598159 SH3BP1Q9Y3L3 701 aa24.31■■□□□ 1.48
SSBP4-205ENST00000598159 CYP17A1P05093 508 aa24.3■■□□□ 1.48
SSBP4-205ENST00000598159 ZNF394Q53GI3 561 aa24.3■■□□□ 1.48
SSBP4-205ENST00000598159 DCAF17Q5H9S7 520 aaPredicted RBP24.3■■□□□ 1.48
SSBP4-205ENST00000598159 PPP1R26Q5T8A7 1209 aaPredicted RBP24.3■■□□□ 1.48
SSBP4-205ENST00000598159 RHBDF2Q6PJF5 856 aa24.3■■□□□ 1.48
SSBP4-205ENST00000598159 PRR23BQ6ZRT6 265 aa24.3■■□□□ 1.48
SSBP4-205ENST00000598159 EZH1Q92800 747 aaPredicted RBP24.3■■□□□ 1.48
SSBP4-205ENST00000598159 TMEM176AQ96HP8 235 aa24.3■■□□□ 1.48
SSBP4-205ENST00000598159 CISHQ9NSE2 258 aa24.3■■□□□ 1.48
SSBP4-205ENST00000598159 MAN1B1Q9UKM7 699 aa24.3■■□□□ 1.48
SSBP4-205ENST00000598159 TRIM49BA6NDI0 452 aa24.29■■□□□ 1.48
SSBP4-205ENST00000598159 TLR5O60602 858 aa24.29■■□□□ 1.48
SSBP4-205ENST00000598159 ADH1CP00326 375 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms