RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 BAP1Q92560 729 aa21.42■■□□□ 1.02
PNKP-211ENST00000598020 KCNK12Q9HB15 430 aa21.42■■□□□ 1.02
PNKP-211ENST00000598020 CYLDQ9NQC7 956 aa21.42■■□□□ 1.02
PNKP-211ENST00000598020 NUP210Q8TEM1 1887 aaPredicted RBP21.41■■□□□ 1.02
PNKP-211ENST00000598020 ITIH6Q6UXX5 1313 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 ECI2O75521 394 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 GFPT2O94808 682 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 CFHP08603 1231 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 KRT9P35527 623 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 TUBP50607 506 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 PDE6CP51160 858 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 IFRD2Q12894 506 aaPredicted RBP21.41■■□□□ 1.02
PNKP-211ENST00000598020 TXNDC8Q6A555 127 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 CMTM8Q8IZV2 173 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 EPS8L1Q8TE68 723 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 E2F7Q96AV8 911 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 SLITRK6Q9H5Y7 841 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 LRRC4Q9HBW1 653 aa21.41■■□□□ 1.02
PNKP-211ENST00000598020 CHORDC1Q9UHD1 332 aaPredicted RBP21.41■■□□□ 1.02
PNKP-211ENST00000598020 NOCTQ9UK39 431 aaKnown RBP21.41■■□□□ 1.02
PNKP-211ENST00000598020 A0A1W2PQJ5 194 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 GABBR2O75899 941 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 FCARP24071 287 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 PSEN1P49768 467 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 TKTL1P51854 596 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 PARM1Q6UWI2 310 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 NOP9Q86U38 636 aaKnown RBP21.4■■□□□ 1.02
PNKP-211ENST00000598020 ARID3BQ8IVW6 561 aaPredicted RBP21.4■■□□□ 1.02
PNKP-211ENST00000598020 ZNF276Q8N554 614 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 MAB21L3Q8N8X9 362 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 FGF14Q92915 247 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 ELSPBP1Q96BH3 223 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 SLC4A5Q9BY07 1137 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 ZFP14Q9HCL3 533 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 CNGB3Q9NQW8 809 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 TLR8Q9NR97 1041 aaKnown RBP21.4■■□□□ 1.02
PNKP-211ENST00000598020 OBP2AQ9NY56 170 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 GMIPQ9P107 970 aa21.4■■□□□ 1.02
PNKP-211ENST00000598020 MYO16Q9Y6X6 1858 aa21.39■■□□□ 1.02
PNKP-211ENST00000598020 OLFM2O95897 454 aa21.39■■□□□ 1.01
PNKP-211ENST00000598020 ZBED1O96006 694 aa21.39■■□□□ 1.01
PNKP-211ENST00000598020 OAS1P00973 400 aaKnown RBP21.39■■□□□ 1.01
PNKP-211ENST00000598020 CCDC172P0C7W6 258 aa21.39■■□□□ 1.01
PNKP-211ENST00000598020 CDH5P33151 784 aaPredicted RBP21.39■■□□□ 1.01
PNKP-211ENST00000598020 ACADSBP45954 432 aa21.39■■□□□ 1.01
PNKP-211ENST00000598020 ZNF268Q14587 947 aaPredicted RBP21.39■■□□□ 1.01
PNKP-211ENST00000598020 TMEM110Q86TL2 294 aa21.39■■□□□ 1.01
PNKP-211ENST00000598020 WDTC1Q8N5D0 677 aa21.39■■□□□ 1.01
PNKP-211ENST00000598020 COL25A1Q9BXS0 654 aaPredicted RBP21.39■■□□□ 1.01
PNKP-211ENST00000598020 NUMBLQ9Y6R0 609 aa21.39■■□□□ 1.01
PNKP-211ENST00000598020 BDP1A6H8Y1 2624 aa21.39■■□□□ 1.01
PNKP-211ENST00000598020 VCANP13611 3396 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 TRAV19A0A0A6YYK7 116 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 C2orf78A6NCI8 922 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 USP17L7P0C7H9 530 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 FERP16591 822 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 AVPR1AP37288 418 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 RGS7P49802 495 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 CDR2Q01850 454 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 ADIGQ0VDE8 80 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 HECTD3Q5T447 861 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 TANGO2Q6ICL3 276 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 IRF2BP2Q7Z5L9 587 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 SCD5Q86SK9 330 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 SIX6OS1Q8N1H7 587 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 ARHGAP18Q8N392 663 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 ULBP1Q9BZM6 244 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 CLIC5Q9NZA1 410 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 AIPL1Q9NZN9 384 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 CYTH4Q9UIA0 394 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 CEP83Q9Y592 693 aa21.38■■□□□ 1.01
PNKP-211ENST00000598020 FBXO21O94952 628 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 LSM8O95777 96 aaKnown RBP21.37■■□□□ 1.01
PNKP-211ENST00000598020 ASGR2P07307 311 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 HDCP19113 662 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 PGFP49763 221 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 SLC7A9P82251 487 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 PDCLQ13371 301 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 TDGQ13569 410 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 BHLHA9Q7RTU4 235 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 SLC44A3Q8N4M1 653 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 TMEM35BQ8NCS4 154 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 RSAD2Q8WXG1 361 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 IRGQQ8WZA9 623 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 NOX5Q96PH1 765 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 SLC22A12Q96S37 553 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 RPP25Q9BUL9 199 aaKnown RBP21.37■■□□□ 1.01
PNKP-211ENST00000598020 NUCKS1Q9H1E3 243 aaKnown RBP21.37■■□□□ 1.01
PNKP-211ENST00000598020 KIF9Q9HAQ2 790 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 CAPN11Q9UMQ6 739 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 SORCS3Q9UPU3 1222 aa21.37■■□□□ 1.01
PNKP-211ENST00000598020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.37■■□□□ 1.01
PNKP-211ENST00000598020 A0A0C4DFX4 3053 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 A0A1W2PQH9 124 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 LRRC53A6NM62 1247 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 ABL1P00519 1130 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 TCF3P15923 654 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 CHRNB2P17787 502 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 VIPR2P41587 438 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 DAOAP59103 153 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms