RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 KIAA1257Q9ULG3 409 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 HOXD8P13378 290 aaPredicted RBP23.7■■□□□ 1.38
SRRM1-222ENST00000596378 TAC1P20366 129 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 GTF2A2P52657 109 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 YARSP54577 528 aaKnown RBP23.7■■□□□ 1.38
SRRM1-222ENST00000596378 PPP1R21Q6ZMI0 780 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 C3orf62Q6ZUJ4 267 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 FAM47EQ6ZV65 393 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 SPOCK2Q92563 424 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 DYNC1LI2O43237 492 aaPredicted RBP23.7■■□□□ 1.38
SRRM1-222ENST00000596378 PAPSS1O43252 624 aaPredicted RBP23.7■■□□□ 1.38
SRRM1-222ENST00000596378 IL4RP24394 825 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 RPA3P35244 121 aaPredicted RBP23.7■■□□□ 1.38
SRRM1-222ENST00000596378 IGDCC3Q8IVU1 814 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 OR6B3Q8NGW1 331 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 FBF1Q8TES7 1133 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 CLEC4CQ8WTT0 213 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 ABHD16BQ9H3Z7 469 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 PSMC3IPQ9P2W1 217 aaPredicted RBP23.7■■□□□ 1.38
SRRM1-222ENST00000596378 GRID1Q9ULK0 1009 aa23.7■■□□□ 1.38
SRRM1-222ENST00000596378 RALGAPA2Q2PPJ7 1873 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 H7C0C1 242 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 NDC80O14777 642 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 RASSF9O75901 435 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 ATP5OP48047 213 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 GCLCP48506 637 aaPredicted RBP23.69■■□□□ 1.38
SRRM1-222ENST00000596378 HIC1Q14526 733 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 EFHC2Q5JST6 749 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 SPATA21Q7Z572 469 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 C7orf31Q8N865 590 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 ATP11CQ8NB49 1132 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.69■■□□□ 1.38
SRRM1-222ENST00000596378 RNF157Q96PX1 679 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 GCOM2Q9BZD3 368 aaPredicted RBP23.69■■□□□ 1.38
SRRM1-222ENST00000596378 KLK14Q9P0G3 267 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 ZMYND8Q9ULU4 1186 aaPredicted RBP23.69■■□□□ 1.38
SRRM1-222ENST00000596378 CHMP2BQ9UQN3 213 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 HEY1Q9Y5J3 304 aa23.69■■□□□ 1.38
SRRM1-222ENST00000596378 GLTPD2A6NH11 291 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 RECQL4O94761 1208 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 ASMTLO95671 621 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 SMIM10L2AP0DMW4 78 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 SMIM10L2BP0DMW5 78 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 GEMIN4P57678 1058 aaKnown RBP23.68■■□□□ 1.38
SRRM1-222ENST00000596378 NR1H3Q13133 447 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 SLC35F5Q8WV83 523 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 SGSM3Q96HU1 749 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 SMC6Q96SB8 1091 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 HGSO14964 777 aaPredicted RBP23.68■■□□□ 1.38
SRRM1-222ENST00000596378 SLC6A3Q01959 620 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 ZBTB6Q15916 424 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 SOWAHAQ2M3V2 549 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 TTC39CQ8N584 583 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 DENND1AQ8TEH3 1009 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 PTPN18Q99952 460 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 SLC4A5Q9BY07 1137 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 SLC12A4Q9UP95 1085 aa23.68■■□□□ 1.38
SRRM1-222ENST00000596378 E7ESA3 106 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 UBOX5O94941 541 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 PDGFRBP09619 1106 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 CCDC130P13994 396 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 SDC4P31431 198 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 ATXN1P54253 815 aaKnown RBP23.67■■□□□ 1.38
SRRM1-222ENST00000596378 IL9RQ01113 521 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 PLEKHH3Q7Z736 793 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 PQLC3Q8N755 202 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 PLD5Q8N7P1 536 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 THOC1Q96FV9 657 aaKnown RBP23.67■■□□□ 1.38
SRRM1-222ENST00000596378 PAFAH2Q99487 392 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 SNRNP25Q9BV90 132 aaKnown RBP23.67■■□□□ 1.38
SRRM1-222ENST00000596378 MAGEB5Q9BZ81 275 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 PLEKHA5Q9HAU0 1116 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 SLC24A2Q9UI40 661 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 SLC45A1Q9Y2W3 748 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 AVILO75366 819 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 SUN1O94901 812 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 CA4P22748 312 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 ADORA2BP29275 332 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 SLC1A5Q15758 541 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 PPP6R3Q5H9R7 873 aaPredicted RBP23.67■■□□□ 1.38
SRRM1-222ENST00000596378 ZNF618Q5T7W0 954 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 C9orf57Q5W0N0 161 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 ANKRD23Q86SG2 305 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 SESTD1Q86VW0 696 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 PALM2Q8IXS6 379 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 PDIK1LQ8N165 341 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 TMEM40Q8WWA1 233 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 TRIM6Q9C030 488 aaPredicted RBP23.67■■□□□ 1.38
SRRM1-222ENST00000596378 PCDH18Q9HCL0 1135 aa23.67■■□□□ 1.38
SRRM1-222ENST00000596378 A8MXQ7 604 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 PRPF4O43172 522 aaKnown RBP eCLIP23.66■■□□□ 1.383e-6■■■□□ 16.6
SRRM1-222ENST00000596378 CYP2C9P11712 490 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 PHBP35232 272 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 RNASELQ05823 741 aaKnown RBP23.66■■□□□ 1.38
SRRM1-222ENST00000596378 DNAJC3Q13217 504 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 TFDP2Q14188 446 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 STILQ15468 1287 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 FAXCQ5TGI0 409 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 NOTUMQ6P988 496 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 TMEM110Q86TL2 294 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms