RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 PCMTD1Q96MG8 357 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 RNF38Q9H0F5 515 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 CCSER2Q9H7U1 834 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 NMUR1Q9HB89 426 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 PNPLA8Q9NP80 782 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 COMMD8Q9NX08 183 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 OSER1Q9NX31 292 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 HESX1Q9UBX0 185 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 CA14Q9ULX7 337 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 SCML2Q9UQR0 700 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 TMEM221A6NGB7 291 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 LRRC10BA6NIK2 292 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 M0R296 226 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 OAS1P00973 400 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 USP17L7P0C7H9 530 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 ZDHHC11BP0C7U3 371 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 HDCP19113 662 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 GDI1P31150 447 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 CLCN1P35523 988 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 POLR2FP61218 127 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 ADIGQ0VDE8 80 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 SLC47A2Q86VL8 602 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 MFSD6LQ8IWD5 586 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 PDZD8Q8NEN9 1154 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 ZNF606Q8WXB4 792 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 ASIC4Q96FT7 647 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 ZFYVE19Q96K21 471 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 NAP1L5Q96NT1 182 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 TRMT61BQ9BVS5 477 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 FBXO44Q9H4M3 255 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 NLRC4Q9NPP4 1024 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 PLCB1Q9NQ66 1216 aa14.53□□□□□ -0.08
SHKBP1-207ENST00000595631 A0A1W2PQH9 124 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 DPYSL4O14531 572 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 SETSIPP0DME0 302 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 LCP1P13796 627 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 PSMC3P17980 439 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 WEE1P30291 646 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 PLA2G4AP47712 749 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 TKTL1P51854 596 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 ZXDBP98169 803 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 STILQ15468 1287 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 RAB41Q5JT25 222 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 PMF1Q6P1K2 205 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 SCD5Q86SK9 330 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 PASD1Q8IV76 773 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 FAM71AQ8IYT1 594 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 CELF5Q8N6W0 485 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 BPIFB1Q8TDL5 484 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 SLC35F5Q8WV83 523 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 OVCA2Q8WZ82 227 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 ERGIC2Q96RQ1 377 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 ULBP1Q9BZM6 244 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 TSPY26PQ9H489 355 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 RTN4Q9NQC3 1192 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 SLC2A4RGQ9NR83 387 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 TDP1Q9NUW8 608 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 SMPD4Q9NXE4 827 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 ZMYM5Q9UJ78 669 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 NUDT5Q9UKK9 219 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 FBXL21Q9UKT6 434 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 USP3Q9Y6I4 520 aa14.52□□□□□ -0.09
SHKBP1-207ENST00000595631 TRIOO75962 3097 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 FAM170AA1A519 330 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 KRBA1A5PL33 1030 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 SOBPA7XYQ1 873 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 F8VZ95 297 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 SCAMP3O14828 347 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 MDM4O15151 490 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 COCHO43405 550 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 OLFM2O95897 454 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 TBX18O95935 607 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 MBL2P11226 248 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 PPP3CCP48454 512 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 SLC8A3P57103 927 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 HECTD3Q5T447 861 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 SNX30Q5VWJ9 437 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 LRSAM1Q6UWE0 723 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 BHLHA9Q7RTU4 235 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 CCDC186Q7Z3E2 898 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 YAF2Q8IY57 180 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 SIX5Q8N196 739 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 NEK11Q8NG66 645 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 DEPDC1BQ8WUY9 529 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 E2F7Q96AV8 911 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 STK33Q9BYT3 514 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 UBXN6Q9BZV1 441 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 BRD9Q9H8M2 597 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 LRRC4Q9HBW1 653 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 TLR8Q9NR97 1041 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 CYTH4Q9UIA0 394 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 CPQQ9Y646 472 aa14.51□□□□□ -0.09
SHKBP1-207ENST00000595631 A0A1B0GTH6 734 aa14.5□□□□□ -0.09
SHKBP1-207ENST00000595631 GOLGA6L19H0YKK7 550 aa14.5□□□□□ -0.09
SHKBP1-207ENST00000595631 ZNF263O14978 683 aa14.5□□□□□ -0.09
SHKBP1-207ENST00000595631 MED7O43513 233 aa14.5□□□□□ -0.09
SHKBP1-207ENST00000595631 TLR5O60602 858 aa14.5□□□□□ -0.09
SHKBP1-207ENST00000595631 GFPT2O94808 682 aa14.5□□□□□ -0.09
SHKBP1-207ENST00000595631 SERPINC1P01008 464 aa14.5□□□□□ -0.09
SHKBP1-207ENST00000595631 RFX1P22670 979 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms