RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 PIK3CAP42336 1068 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 RAP1GAPP47736 663 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 CDH8P55286 799 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 DLG4P78352 724 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 DMC1Q14565 340 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 HSF5Q4G112 596 aaPredicted RBP14.08□□□□□ -0.16
APOC1-209ENST00000592885 CEP135Q66GS9 1140 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 NAIF1Q69YI7 327 aaPredicted RBP14.08□□□□□ -0.16
APOC1-209ENST00000592885 SV2AQ7L0J3 742 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 C11orf74Q86VG3 221 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 CRYBG2Q8N1P7 616 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 CCDC34Q96HJ3 373 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 DNAI2Q9GZS0 605 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 RNF38Q9H0F5 515 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 SDCBP2Q9H190 292 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 LINC00597Q9H2U6 94 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 FBXO44Q9H4M3 255 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 CSNK1G1Q9HCP0 422 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 KRT82Q9NSB4 513 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 CFAP97Q9P2B7 532 aa14.08□□□□□ -0.16
APOC1-209ENST00000592885 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.08□□□□□ -0.16
APOC1-209ENST00000592885 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.07□□□□□ -0.16
APOC1-209ENST00000592885 AP1G2O75843 785 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 ABL1P00519 1130 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 ZDHHC11BP0C7U3 371 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 NR2F2P24468 414 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 RPL13P26373 211 aaKnown RBP14.07□□□□□ -0.16
APOC1-209ENST00000592885 ASPAP45381 313 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 VAMP7P51809 220 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 NDUFA8P51970 172 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 LIMK1P53667 647 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 MRPS21P82921 87 aaKnown RBP14.07□□□□□ -0.16
APOC1-209ENST00000592885 INCA1Q0VD86 236 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 DPYDQ12882 1025 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 IFRD2Q12894 506 aaPredicted RBP14.07□□□□□ -0.16
APOC1-209ENST00000592885 DHCR24Q15392 516 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 GAB4Q2WGN9 574 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 HECTD3Q5T447 861 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 PAQR9Q6ZVX9 377 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 ADGRG2Q8IZP9 1017 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 FUKQ8N0W3 1084 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 GUF1Q8N442 669 aaKnown RBP14.07□□□□□ -0.16
APOC1-209ENST00000592885 USP33Q8TEY7 942 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 HHIPQ96QV1 700 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 KCNK16Q96T55 309 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 PNPLA8Q9NP80 782 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 SMPD4Q9NXE4 827 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 ZDHHC9Q9Y397 364 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 MYH10P35580 1976 aa14.07□□□□□ -0.16
APOC1-209ENST00000592885 COCHO43405 550 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 HLA-DRAP01903 254 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 ADH5P11766 374 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 KRT13P13646 458 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 PXNP49023 591 aaPredicted RBP14.06□□□□□ -0.16
APOC1-209ENST00000592885 NDST1P52848 882 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 ELF2Q15723 593 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 PREPLQ4J6C6 727 aaPredicted RBP14.06□□□□□ -0.16
APOC1-209ENST00000592885 C1orf220Q5T0J3 134 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 KRBA2Q6ZNG9 492 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 ACOT1Q86TX2 421 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 TSTD1Q8NFU3 115 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 DDX1Q92499 740 aaKnown RBP14.06□□□□□ -0.16
APOC1-209ENST00000592885 FAXDC2Q96IV6 333 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 ZFRQ96KR1 1074 aaKnown RBP14.06□□□□□ -0.16
APOC1-209ENST00000592885 FAM124BQ9H5Z6 455 aaPredicted RBP14.06□□□□□ -0.16
APOC1-209ENST00000592885 CYP3A43Q9HB55 503 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 MMP17Q9ULZ9 603 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 ATG2BQ96BY7 2078 aa14.06□□□□□ -0.16
APOC1-209ENST00000592885 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.05□□□□□ -0.16
APOC1-209ENST00000592885 K7EQS6 105 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 RHOBTB1O94844 696 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 APODP05090 189 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 PRR29P0C7W0 189 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 ZNF806P0C7X5 589 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 FAM200BP0CF97 657 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 CCDC130P13994 396 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 GTF2H1P32780 548 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 PSMC2P35998 433 aaKnown RBP14.05□□□□□ -0.16
APOC1-209ENST00000592885 MCCD1P59942 119 aaPredicted RBP14.05□□□□□ -0.16
APOC1-209ENST00000592885 EDRF1Q3B7T1 1238 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 PLK5Q496M5 336 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 KBTBD6Q86V97 674 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 RASSF3Q86WH2 238 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 FAM186BQ8IYM0 893 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 C12orf50Q8NA57 414 aaPredicted RBP14.05□□□□□ -0.16
APOC1-209ENST00000592885 CCDC150Q8NCX0 1101 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 ZMIZ2Q8NF64 920 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 SCAMP5Q8TAC9 235 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 SLC2A14Q8TDB8 520 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 CNOT6LQ96LI5 555 aaKnown RBP14.05□□□□□ -0.16
APOC1-209ENST00000592885 PNKPQ96T60 521 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 HNRNPABQ99729 332 aaKnown RBP14.05□□□□□ -0.16
APOC1-209ENST00000592885 SMOQ99835 787 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 NIF3L1Q9GZT8 377 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 TLR8Q9NR97 1041 aaKnown RBP14.05□□□□□ -0.16
APOC1-209ENST00000592885 GMIPQ9P107 970 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 HMGXB4Q9UGU5 601 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 SH3BP1Q9Y3L3 701 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 PCDHA5Q9Y5H7 936 aa14.05□□□□□ -0.16
APOC1-209ENST00000592885 A0A0A0MRY4 1105 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms