RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ERCC5P28715 1186 aaPredicted RBP14.73□□□□□ -0.05
CLIP3-205ENST00000592017 RAD23BP54727 409 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 TAF10Q12962 218 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 ITPRIPL2Q3MIP1 535 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 CCDC183Q5T5S1 534 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 PPP1R26Q5T8A7 1209 aaPredicted RBP14.73□□□□□ -0.05
CLIP3-205ENST00000592017 SASS6Q6UVJ0 657 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 ARHGEF19Q8IW93 802 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 FAM114A1Q8IWE2 563 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 ARL14EPQ8N8R7 260 aaPredicted RBP14.73□□□□□ -0.05
CLIP3-205ENST00000592017 SLC4A11Q8NBS3 891 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 ZMIZ2Q8NF64 920 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 SCAMP5Q8TAC9 235 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 KAT5Q92993 513 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 CHFRQ96EP1 664 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 EBF3Q9H4W6 596 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 THAP9Q9H5L6 903 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 KIF9Q9HAQ2 790 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 FRYLO94915 3013 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 ZNF840PA6NDX5 716 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 USP17L7P0C7H9 530 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 HDCP19113 662 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 RUNX3Q13761 415 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 PON2Q15165 354 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 C1orf228Q6PIY5 440 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 TMEM270Q6UE05 265 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 Q6ZS52 159 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 RBM43Q6ZSC3 357 aaKnown RBP14.72□□□□□ -0.05
CLIP3-205ENST00000592017 CLEC20AQ6ZU45 233 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 RRAGAQ7L523 313 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 IRF2BP1Q8IU81 584 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 ZBTB44Q8NCP5 570 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 EHBP1Q8NDI1 1231 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 LMO3Q8TAP4 145 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 CRACR2AQ9BSW2 395 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 CSNK1G1Q9HCP0 422 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 ZSCAN32Q9NX65 697 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 PCDHB4Q9Y5E5 795 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 COL4A2P08572 1712 aa14.72□□□□□ -0.05
CLIP3-205ENST00000592017 PES1O00541 588 aaKnown RBP14.71□□□□□ -0.05
CLIP3-205ENST00000592017 TNFRSF10BO14763 440 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.05
CLIP3-205ENST00000592017 ZXDBP98169 803 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 SATB1Q01826 763 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 MTF1Q14872 753 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 ZNF77Q15935 545 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 GOLGA7BQ2TAP0 167 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 ZC3H14Q6PJT7 736 aaKnown RBP14.71□□□□□ -0.05
CLIP3-205ENST00000592017 GPRIN1Q7Z2K8 1008 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 SUMF1Q8NBK3 374 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 PDZD8Q8NEN9 1154 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 SH3RF2Q8TEC5 729 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 IER2Q9BTL4 223 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 FAM124BQ9H5Z6 455 aaPredicted RBP14.71□□□□□ -0.05
CLIP3-205ENST00000592017 FBRSL1Q9HCM7 1045 aaKnown RBP14.71□□□□□ -0.05
CLIP3-205ENST00000592017 C2orf42Q9NWW7 574 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 GMIPQ9P107 970 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 ARHGAP26Q9UNA1 814 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 PCDHGA2Q9Y5H1 932 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 OTOGLQ3ZCN5 2332 aa14.71□□□□□ -0.05
CLIP3-205ENST00000592017 KCNJ18B7U540 433 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 LILRB5O75023 590 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 ACO1P21399 889 aaKnown RBP14.7□□□□□ -0.06
CLIP3-205ENST00000592017 HOXC13P31276 330 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 CXCL12P48061 93 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 PPP3CCP48454 512 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 PDE6CP51160 858 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 USP4Q13107 963 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 CCINQ13939 588 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 LRRC32Q14392 662 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 KCNJ12Q14500 433 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 PDGFRLQ15198 375 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 STX1AQ16623 288 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 MAN2A1Q16706 1144 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 SGO2Q562F6 1265 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 NAIF1Q69YI7 327 aaPredicted RBP14.7□□□□□ -0.06
CLIP3-205ENST00000592017 CAVIN1Q6NZI2 390 aaKnown RBP14.7□□□□□ -0.06
CLIP3-205ENST00000592017 CC2D1AQ6P1N0 951 aaPredicted RBP14.7□□□□□ -0.06
CLIP3-205ENST00000592017 C11orf57Q6ZUT1 292 aaPredicted RBP14.7□□□□□ -0.06
CLIP3-205ENST00000592017 SPEM1Q8N4L4 309 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 UBR7Q8N806 425 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 ATRIPQ8WXE1 791 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 DUSP16Q9BY84 665 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 RNF38Q9H0F5 515 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 LINC00597Q9H2U6 94 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 FBXO44Q9H4M3 255 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 SAMSN1Q9NSI8 373 aaKnown RBP14.7□□□□□ -0.06
CLIP3-205ENST00000592017 ANO10Q9NW15 660 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 DUS2Q9NX74 493 aaKnown RBP14.7□□□□□ -0.06
CLIP3-205ENST00000592017 SMPD4Q9NXE4 827 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 TMEM63CQ9P1W3 806 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 CHORDC1Q9UHD1 332 aaPredicted RBP14.7□□□□□ -0.06
CLIP3-205ENST00000592017 NFE2L3Q9Y4A8 694 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 WNT6Q9Y6F9 365 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 PTPRDP23468 1912 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 SPTBN4Q9H254 2564 aa14.7□□□□□ -0.06
CLIP3-205ENST00000592017 HHLA1C9JL84 531 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 CYP26A1O43174 497 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 CALCAP01258 141 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 KRT5P13647 590 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms