RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 GAD2Q05329 585 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 PDIA2Q13087 525 aaKnown RBP20.59■□□□□ 0.89
MBD3-209ENST00000592012 TFDP2Q14188 446 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 FSCN1Q16658 493 aaKnown RBP20.59■□□□□ 0.89
MBD3-209ENST00000592012 SCYL2Q6P3W7 929 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 ARRDC4Q8NCT1 418 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 SMG8Q8ND04 991 aaKnown RBP20.59■□□□□ 0.89
MBD3-209ENST00000592012 KATNAL1Q9BW62 490 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 IPPQ9Y573 584 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 RGS2P41220 211 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 PNPLA4P41247 253 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 PURAQ00577 322 aaKnown RBP20.59■□□□□ 0.89
MBD3-209ENST00000592012 PDK2Q15119 407 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 NOMO1Q15155 1222 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 HIF1AQ16665 826 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 FAM47CQ5HY64 1035 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 GKAP1Q5VSY0 366 aaPredicted RBP20.59■□□□□ 0.89
MBD3-209ENST00000592012 MAP7D3Q8IWC1 876 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 TEKT4Q8WW24 435 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 MAML1Q92585 1016 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 P3H4Q92791 437 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 ZNF560Q96MR9 790 aa20.59■□□□□ 0.89
MBD3-209ENST00000592012 EXOC1LA0A1B0GW35 172 aa20.58■□□□□ 0.89
MBD3-209ENST00000592012 XPOTO43592 962 aaKnown RBP20.58■□□□□ 0.89
MBD3-209ENST00000592012 STIP1P31948 543 aaKnown RBP20.58■□□□□ 0.89
MBD3-209ENST00000592012 MAGEA9P43362 315 aa20.58■□□□□ 0.89
MBD3-209ENST00000592012 RPL34P49207 117 aaKnown RBP20.58■□□□□ 0.89
MBD3-209ENST00000592012 BST2Q10589 180 aaKnown RBP20.58■□□□□ 0.89
MBD3-209ENST00000592012 IFT88Q13099 833 aa20.58■□□□□ 0.89
MBD3-209ENST00000592012 MPP2Q14168 576 aa20.58■□□□□ 0.89
MBD3-209ENST00000592012 ZC3H12AQ5D1E8 599 aaKnown RBP20.58■□□□□ 0.89
MBD3-209ENST00000592012 RIBC1Q8N443 379 aaPredicted RBP20.58■□□□□ 0.89
MBD3-209ENST00000592012 BRAFP15056 766 aa20.58■□□□□ 0.88
MBD3-209ENST00000592012 IFNAR2P48551 515 aa20.58■□□□□ 0.88
MBD3-209ENST00000592012 TAF6P49848 677 aa20.58■□□□□ 0.88
MBD3-209ENST00000592012 HDAC4P56524 1084 aa20.58■□□□□ 0.88
MBD3-209ENST00000592012 KRT81Q14533 505 aa20.58■□□□□ 0.88
MBD3-209ENST00000592012 ZC3H18Q86VM9 953 aaKnown RBP20.58■□□□□ 0.88
MBD3-209ENST00000592012 PLD5Q8N7P1 536 aa20.58■□□□□ 0.88
MBD3-209ENST00000592012 APPL2Q8NEU8 664 aa20.58■□□□□ 0.88
MBD3-209ENST00000592012 CLEC4CQ8WTT0 213 aa20.58■□□□□ 0.88
MBD3-209ENST00000592012 TBCBQ99426 244 aa20.58■□□□□ 0.88
MBD3-209ENST00000592012 PHACTR1Q9C0D0 580 aa20.58■□□□□ 0.88
MBD3-209ENST00000592012 TCRBV7S3A2A0A539 114 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 BANF1O75531 89 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 GNAT1P11488 350 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 ADORA2BP29275 332 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 BCAT1P54687 386 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 NRLP54845 237 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 MSS51Q4VC12 460 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 FNBP1LQ5T0N5 605 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 TADA2BQ86TJ2 420 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 TDRPQ86YL5 185 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 CCDC13Q8IYE1 715 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 APBA2Q99767 749 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 SNX25Q9H3E2 840 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 KCNK9Q9NPC2 374 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 GPATCH2LQ9NWQ4 482 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 ACTL7BQ9Y614 415 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 KIAA0754O94854 1291 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 TFE3P19532 575 aaPredicted RBP20.57■□□□□ 0.88
MBD3-209ENST00000592012 LILRA4P59901 499 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 ROR1Q01973 937 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 LRRC14Q15048 493 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 CA9Q16790 459 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 DARS2Q6PI48 645 aaKnown RBP20.57■□□□□ 0.88
MBD3-209ENST00000592012 SLC26A9Q7LBE3 791 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 SRRM1Q8IYB3 904 aaKnown RBP20.57■□□□□ 0.88
MBD3-209ENST00000592012 LRRC34Q8IZ02 419 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 CACNA2D3Q8IZS8 1091 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 OTUD6BQ8N6M0 293 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 PQLC3Q8N755 202 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 C11orf84Q9BUA3 381 aaPredicted RBP20.57■□□□□ 0.88
MBD3-209ENST00000592012 SNRNP25Q9BV90 132 aaKnown RBP20.57■□□□□ 0.88
MBD3-209ENST00000592012 VPS37BQ9H9H4 285 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 PCDH18Q9HCL0 1135 aa20.57■□□□□ 0.88
MBD3-209ENST00000592012 MDM4O15151 490 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 GPX6P59796 221 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 ANKRD20A8PQ5CZ79 823 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 TAB3Q8N5C8 712 aaPredicted RBP20.56■□□□□ 0.88
MBD3-209ENST00000592012 MGARPQ8TDB4 240 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 SLC2A14Q8TDB8 520 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.56■□□□□ 0.88
MBD3-209ENST00000592012 CENPIQ92674 756 aaPredicted RBP20.56■□□□□ 0.88
MBD3-209ENST00000592012 CABS1Q96KC9 395 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 NCAPGQ9BPX3 1015 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 ADAM33Q9BZ11 813 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 DCAF8L1A6NGE4 600 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 E7ESA3 106 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 RDXP35241 583 aaKnown RBP20.56■□□□□ 0.88
MBD3-209ENST00000592012 PTPN9P43378 593 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 ARL4CP56559 192 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 SV2CQ496J9 727 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 C1orf228Q6PIY5 440 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 CAPN12Q6ZSI9 719 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 ARCQ7LC44 396 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 PIGWQ7Z7B1 504 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 FAM228AQ86W67 206 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 VSIG1Q86XK7 387 aa20.56■□□□□ 0.88
MBD3-209ENST00000592012 IFNL1Q8IU54 200 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms